Shinella sp. XGS7: LHJ69_03975
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Entry
LHJ69_03975 CDS
T10581
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_03975
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_03975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UDF36238
LinkDB
All DBs
Position
complement(891143..893836)
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AA seq
897 aa
AA seq
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MHASTALPDNGRPALTTLKALPRLMALGLGAWASLGTAAWAAEDQVLAQADTSAAAASRK
AAGGEVQALDTVEVRGVRATVKRNLAEKRESQNIVDTISAEDVGKFPDKNVADSLQRVPG
ISVDRTWGEGRDIFVRGTDKNLNMTQLNGQAVASAYWWKNDAQSRGFNYDILPSEIVGSL
DVYKSPSADLDEGSIGGLVIVKTRRPMDFKAPLTLQASAEATYSKLPKKTDPQVSGLLNW
KNEANDFGVLLALSRQERSMRRDGLENFTDTTKYTIVDQNGVSTPNAYASWGGGSAIFRQ
DRKRTTANLVLQFRPNSRTDLVLNALNSDMDMNNNNQNYLWLAGGLADKNNVLRVSDPKF
ITTSDGTKALVSGTVGPTDGVAFEPIYREAYIKSRLLDLDGSYVGEGWKLHGQVGITSAA
GGSKHDRNFWFTGNTRTSFDMAKDRYDVKYLDISPLDASKLTLQGARDWIRRMEGKEKYA
QGDLSWDLDGSFFSGVKVGLKYRDNTVSNRRTIGTVGPGSTGWQSLSLADLSTGASPLLS
QAAASAGSLVQYAWVDDGLAASKGFTMYDKGMVYKEALGEYYRLNEKITAAYAKADFAVD
RWRGDFGLRVVRTQQTSQANQDLDGKGNYQPVSLGRSYTEVLPSLNAVYELRRDIVVRGA
LSRAMARNTYSDLSASTEVSGTTNAATAGNPLLKPYHANQAEIGIEWYFADASLLSATFF
AKRLDTFIYTASKQESVGGVMRSVTRPFNADNGATINGVEMQWQQAFAGGFGTLVNYTLT
DAKSGSLAGGQRLNVVGNSRHQLNASVYYERNGVSLRFSHNYRSKSYGGLNEGGQDVTSA
YGQWDASANWDLTPALSLFASAVNIGNAVIRTNTTDGLPVGVYENGSRYSLGLRAKF
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcaagcacagccctcccggacaacggccgcccggccctcacgacgctcaaagcc
ctgccccgcctgatggccctgggcctgggtgcctgggccagcctgggcacggccgcctgg
gcggccgaggaccaggtgctggcccaggccgacacgagcgctgcggccgcgagccgcaag
gcggccggcggcgaggtgcaggccctggacacggtggaggtgcgcggcgtgcgtgccacg
gtcaagcgcaatctggccgagaagcgcgagtcgcagaacatcgtggacaccatcagcgcc
gaggacgtgggcaagttccccgacaagaacgtggccgattcgctccagcgcgtgcccggc
atctcggtggaccggacctggggcgagggccgcgacatcttcgtgcgcggcaccgacaag
aacctcaatatgacccagctcaacggccaggccgtggcctcggcctattggtggaagaac
gacgcccagagccgcggcttcaactacgacatcctgccctccgagatcgtgggcagcctg
gacgtgtacaagagcccctcggccgatctggacgagggcagcatcggcggcctggtgatc
gtcaagacccgccggcccatggacttcaaggccccgctcaccctgcaggcctcggccgag
gccacctacagcaagctgccgaagaagaccgacccccaggtctcgggcctgctgaactgg
aagaacgaggccaatgacttcggcgtgctgctggccctgagccgccaggagcgcagcatg
cgccgcgacggcctggagaacttcaccgacacgaccaagtacaccatcgtcgaccagaac
ggcgtgagcacgcccaatgcctacgcctcctggggcggcggctcggccatcttccgtcag
gaccgcaagcgcaccacggccaatctggtgctgcagttccgccccaacagccggaccgat
ctggtgctcaacgccctgaactcggacatggacatgaacaacaacaaccagaactacctc
tggttggccggcggcctggcggacaagaacaatgtgctgcgcgtcagcgaccccaagttc
atcaccacctcggacggcaccaaggccctggtctcgggcacggtgggccccaccgacggc
gtggccttcgagcccatctaccgcgaggcctatatcaagtcgcgcctgctggacctggac
ggcagctatgtgggcgagggctggaagctgcacggccaggtgggcatcacctcggccgcg
ggcggcagcaagcacgaccgcaacttctggttcaccggcaacacccgcaccagcttcgac
atggcgaaggaccgctatgacgtgaagtacctggacatcagcccgctggacgccagcaag
ctgaccctgcaaggcgcacgcgactggatccgccgcatggagggcaaggagaagtacgcc
cagggcgatctgagctgggacctggacggcagcttcttcagcggcgtgaaggtgggcctg
aagtaccgcgacaacacggtcagcaaccgccgcaccatcggcaccgtgggcccgggcagc
accggctggcagtccctctccctggccgacctctccacgggcgcctcccccctgctgagc
caggccgcggcctcggccggctccctggtgcagtacgcctgggtggacgacggtctggcc
gcgagcaagggcttcaccatgtacgacaagggcatggtctacaaggaagccctgggcgag
tactaccgcctcaacgagaagatcaccgcggcctatgccaaggccgacttcgcggtggat
cgctggcgtggtgacttcggtctgcgcgtggtgcgcacccagcagacctcgcaggccaac
caggacctggacggcaagggcaactaccagcccgtgagcctgggccgcagctacaccgag
gtgctgcccagcctgaacgcggtctacgagctgcgccgcgacatcgtcgtgcgcggcgcc
ctctcccgtgccatggcccgcaacacctacagcgatctgagcgccagcaccgaggtcagc
ggcaccaccaatgccgccacggccggcaaccccctgctcaagccctatcacgccaaccag
gccgagatcggcatcgagtggtacttcgccgatgcctccctgctctcggccaccttcttc
gccaagcgcctggacaccttcatctacaccgcctccaagcaggagagcgtgggcggcgtg
atgcgcagcgtgacccgccccttcaacgccgacaacggcgccaccatcaacggtgtggag
atgcagtggcagcaggcctttgccggcggcttcggcaccctggtgaactacaccctcacc
gatgcgaaatccggcagcctggccggcggccagcgcctgaacgtggtgggcaactcgcgc
caccagctcaacgccagcgtctactacgagcgcaacggcgtgagcctgcggttctcgcac
aactaccgctccaagtcctatggcggcctgaacgagggcggccaggacgtgaccagcgcc
tacggccagtgggacgcatcggccaactgggacctcacgcccgcactgagcctcttcgcc
tcggccgtgaacatcggcaatgccgtgatccgcaccaacaccaccgacggcctgccggtg
ggcgtctacgagaacggctcgcgctacagcctgggcctgcgcgccaagttctga
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