KEGG   Shinella sp. XGS7: LHJ69_04260
Entry
LHJ69_04260       CDS       T10581                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shin  Shinella sp. XGS7
Pathway
shin03030  DNA replication
shin03430  Mismatch repair
shin03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LHJ69_04260
   03430 Mismatch repair
    LHJ69_04260
   03440 Homologous recombination
    LHJ69_04260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shin03032]
    LHJ69_04260
   03400 DNA repair and recombination proteins [BR:shin03400]
    LHJ69_04260
Enzymes [BR:shin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LHJ69_04260
DNA replication proteins [BR:shin03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LHJ69_04260
DNA repair and recombination proteins [BR:shin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LHJ69_04260
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: UDF36292
LinkDB
Position
950152..950802
AA seq 216 aa
MSPTIAVIDFETSGLPPQAGGRATEIAAVLLRDGEIVDQYQSLMRTDVWVPPFIERLTGI
SNAMLAEAPPAATVMREVADFTRGSALVAHNASFDRGFWRAEHERAGLALDPLHEEFACT
VLLARRLYPEAPDCKLGTLARYHRLPDNGRAHRALADARTTAQLLLRMQADLSQRYGAEL
GPLVSEHGLLARLQRASRTALGRCVRDYARQRQVAI
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagcccgaccattgccgtcatcgacttcgagaccagcggcctgccgccccaggcgggc
gggcgcgccaccgagattgccgccgtgctgctgcgcgacggcgagatcgtggaccagtac
cagagcctgatgcgcacggacgtctgggtgccgcccttcatcgagcggctcaccggcatc
agcaatgccatgctggccgaggccccgccagccgccaccgtgatgcgcgaggtggccgat
ttcacccgcggcagcgccctggtggcgcacaacgcgagctttgaccggggcttctggcgc
gccgagcatgagcgcgccggtctggccctggatccgctgcatgaggagttcgcctgcacc
gtgctgctggcgcggcgcctctaccccgaggcaccggactgcaagctgggcaccctggcg
cgctatcaccggctgcccgacaacggccgcgctcaccgcgcgctggccgatgcgcgcacc
acggcccagctgctgctgcgcatgcaggccgatctgagccagcgctacggggccgagctc
ggccccctggtgagcgagcatggcctgctggcgcggctgcagcgtgccagccgcacggcc
ctggggcgctgcgtgcgcgattacgcccggcagcgccaggtcgcgatctga

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