Shinella sp. XGS7: LHJ69_05555
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Entry
LHJ69_05555 CDS
T10581
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_05555
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_05555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UDF36542
LinkDB
All DBs
Position
complement(1215750..1218539)
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AA seq
929 aa
AA seq
DB search
MKLNKLARSLALIGIGVHAAGMAWAQSGADVQKVERVEITGSSIKRLASEGALPVQVISA
EELSRKGITTAEQMLAQMGVNGTGADSAVANNNVFGSDTDRLTGGSANANLRGLGPGSTL
VLLNGRRVSTHGMSGGAVDLNAIPMAAVARVEVLKDGASAIYGTDAIGGVINFILKKDMQ
GVDVGVNFSQPLESGGGTKRRASVTGGFGNLDRDRFNVLASLTLDKDDILRGNERSWANG
FQPERYLSPDSSSHPYANVINAAGTALGATGSTIGSSDPTRYTRINPLSLRGACDSIPTG
VQYQPQLWNASAAANRYICNTDYGAQYMLAAPKDAYNLVTRGNFLLSESHTAFVELTASR
TTSKAELTPAQFSTTTAAGNHYPVGGQYYLNLKDFGVNTYDTSLPIAYRWRMQDFGNRVI
ENVSDNKRLAAGLDGDLGEYSYKLGLSTAKAEAWSNLIDGYAYTAKLNQALKTGIINPWL
KPGEKQTQAAMDLIESTKARGRLQGGETSLTQFDGALSGALMKLPAGTMDFAVGFDLRRE
TYEFAPEPGAFNCVSSLSNGATDVLLCPGNSAIGKQSRNIKAVYGELAVPVFKGFDLQLA
LRHDRYSDVGSTTNPKIAFRFQPNDLVLLRGSVNTGFKAPSFQQLAPNTAPLLDTADWRD
PELCPTVSASNPNCTRRLDYIVTGNPKLKPEKSTQATVGIVFSPLRDLSFYADYWRVDLD
DRLRKLTLSEVKNNYELFKDRFARDSTGRVALVTTGWENAADSSTKGLDWGGSYLFKHSS
GTWRASVNGTYMISHKERALENQPLQELVGQFALRTLYLRNKLSADIGWARDNWATTLTT
IYKSGYMDQDMTRFGTPRREVSAYTTVNLFASYTGFKNTTITAGLNNLFDKAPPFTYHNV
DDVVGAGWDPRVGDPFGRTLSVSVNYSFR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattgaacaaactcgcgcgcagcctggcgctgatcggcattggcgtacacgccgcc
ggcatggcctgggcgcagagcggcgccgatgtgcagaaggttgaacgcgtcgagatcacg
ggctccagcatcaagcgcctggcctccgagggcgccctgccggtgcaggtcatctcggcc
gaggaactcagccgcaagggcatcaccaccgccgagcagatgctggcccagatgggcgtg
aacggcaccggcgccgacagcgccgtggccaacaacaatgtgttcggctccgacaccgac
cgcctgaccggcggctcggccaatgccaatctgcgcggcctgggcccgggcagcaccctg
gtgctgctgaacggccgtcgcgtctccacccacggcatgagcggtggcgcggtggacctg
aacgccatccccatggcggccgtggcccgcgtcgaggtgctcaaggacggcgcctccgcc
atctacggcaccgacgccatcggcggcgtgatcaacttcatcctgaagaaggacatgcag
ggtgtggacgtgggcgtcaacttctcccagcccctggagtccggcggcggcacaaagcgc
cgcgccagcgtcaccggcggcttcggcaatctggaccgcgaccgcttcaatgtgctggcc
agcctgaccctggacaaggacgacatcctgcgtggcaacgagcgcagctgggccaacggc
ttccagccggagcgctatctctcgccggactcctccagccacccctatgccaatgtgatc
aatgccgccggcacggccctgggcgctaccggctccaccatcggtagcagcgatccgacc
cgctacacccgcatcaacccgctcagcctgcggggcgcctgcgactccattcccaccggc
gtgcagtaccagccccagctctggaacgccagcgccgcggccaaccgctatatctgcaac
accgactacggcgcccagtacatgctggccgcacccaaggacgcctacaacctggtgacc
cgcggcaacttcctgctcagcgagagccacacggccttcgtggagctgaccgcctcgcgc
accacctccaaggccgagctgacccccgcgcagttcagcaccaccacggcggccggcaac
cattacccggtcggtggccagtactacctgaacctcaaggacttcggggtcaacacctac
gacaccagcctgcccatcgcctaccgctggcgcatgcaggacttcggcaaccgggtgatc
gagaacgtctcggacaacaagcgcctggccgccggcctggacggcgatctcggcgagtac
agctacaagctgggcctgtccaccgccaaggccgaggcctggtccaatctgattgacggc
tacgcctacaccgccaagctcaaccaggcgctgaagaccggcatcatcaacccctggctc
aagcccggcgagaagcagacccaggccgccatggacctgatcgagtccaccaaggcccgc
ggtcgcctgcaaggcggcgagacctcgctgacccagttcgacggcgccctctccggcgcg
ctgatgaagctgccggccggcaccatggacttcgccgtgggcttcgacctgcgccgcgag
acctatgagttcgcccccgaacccggcgccttcaactgcgtttccagcctgagcaatggc
gccaccgatgtgctgctgtgccccggcaacagcgccattggcaagcaaagccgcaatatc
aaggccgtttacggcgagctggcggtgcccgtgttcaagggcttcgacctgcagctggcc
ctgcgtcacgaccgctacagcgatgtgggcagcaccaccaacccgaagatcgccttccgc
ttccagcccaatgacctggtgctgctgcgcggttcggtcaacaccggcttcaaggccccc
agcttccagcagctggcgcccaataccgccccgctgctggatacggccgactggcgcgat
cccgagctttgccccaccgtcagcgccagcaaccccaactgcacgcgccgcctggactac
atcgtgacgggcaatcccaagctcaagcccgagaagtccacccaggccacggtgggcatc
gtgttctcgccgctgcgtgatctgtccttctacgccgactattggcgcgtggacctggac
gaccgcctgcgcaagctgaccctcagcgaggtgaagaacaactacgagctgttcaaggac
cgcttcgcccgcgacagcaccggtcgcgtggccctggtgaccaccggctgggaaaacgcg
gccgacagctccaccaagggtctggactggggcggcagctatctgttcaagcacagcagc
ggcacctggcgcgccagcgtgaacggcacctacatgatcagccacaaggagcgtgccctg
gagaaccagccgctgcaggagctggtgggccaattcgcgctgcgcaccctgtatctgcgc
aacaagctgagcgccgacatcggctgggcgcgcgacaactgggccaccaccctgaccacg
atctacaagtcgggctatatggaccaggacatgacgcgcttcggcacgccgcgccgcgag
gtcagcgcctacaccacggtcaatctgttcgccagctacaccggcttcaagaacaccacc
atcacggccggcctgaacaatctgttcgacaaggccccgcccttcacgtatcacaacgtg
gacgatgtggtgggcgccggctgggatccgcgcgtgggcgaccccttcggccgcaccctg
agcgtctcggtgaactacagcttccgctga
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