Shinella sp. XGS7: LHJ69_05900
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Entry
LHJ69_05900 CDS
T10581
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shin03400
]
LHJ69_05900
Enzymes [BR:
shin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LHJ69_05900
DNA repair and recombination proteins [BR:
shin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LHJ69_05900
Prokaryotic type
LHJ69_05900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
UDF36609
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All DBs
Position
complement(1288387..1289640)
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AA seq
417 aa
AA seq
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MMNTPFPPRRSAALARLAQLDPQAYARTRNALEGAVSRLSPYVSHGLLALPELLQAAAAR
QPGLKPQHSWVYELGWREYFQDSWHWRGEAILQDLHPGPLPGSAYLQGLPEDVRQGRTGL
AVIDRAVAQLYDEGWLHNHARLWLASYLVHGRKLHWRVGADWLYGHLLDGDLASNHLSWQ
WVAGTGSRQPYLFNAENVRRHAPAPWRVDGSALDCPYEALEALARSPGRRLPPAPASGPG
LAEPALHGAPPPELAPLAEVVDWRGREVWLVHPWSLAPPPAALGPEVLRVGVYLREFHQA
WPWSARRWQFVDAALSAGSGEGAGVQQRCLLDAAGLARAIGGARRVWMQAAPHWVPWQAA
WSLAPALQLRPVPRVFARPEEPCESFSQWWRRCGAARAPDLEALPGFLSAGAAVPVT
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacgcccttcccgccccgccgcagcgccgccctggcccgcctggcccagctg
gacccgcaggcctatgcccgcacgcgcaatgcgctggaaggcgcggtgagccggctctcg
ccctatgtgagccacggcctgctggccctgcccgagctgctgcaggccgcggccgcgcgc
cagcccgggctcaagccccagcacagctgggtctatgagctgggctggcgcgagtacttc
caggacagctggcactggcgcggcgaggccatcctgcaggacctgcaccccggccccctg
ccgggcagcgcctacctccaggggctgcccgaggatgtgcgccagggccgcaccggcctg
gccgtgatcgaccgcgccgtggcccagctctatgacgagggctggctgcacaaccacgcg
cggctctggctggccagctatctggtgcatgggcgcaagctgcactggcgcgtgggcgcc
gactggctctacggccatctgctggacggcgacctggccagcaaccacctgagctggcaa
tgggtggcgggcacgggcagccgccagccctatctcttcaatgccgagaatgtgcggcgc
cacgcgcccgccccctggcgggtggacggcagcgccctggactgcccctacgaggcgctg
gaggccctggcccgcagccccggccgccgcctgcccccggcgcccgcatccggcccgggc
ctggccgagcccgccctgcacggcgcgccgccgccggagctggcgcccctggccgaggtc
gtggactggcgcggccgcgaggtctggctggtgcatccctggtcgctggcgccaccgccc
gcggccctgggccccgaggtgctgcgcgtgggcgtctacctgcgcgagttccaccaggcc
tggccctggtcggcacggcgctggcagttcgtggatgcggccctgagcgccggctccggc
gagggcgcgggcgtgcagcagcgctgcctgctggacgccgccggcctggcccgcgccatc
ggcggcgcgcgccgggtctggatgcaggccgcgccgcactgggtgccctggcaggccgcc
tggagcctggcgccggccctgcagctgcggccggtgccgcgcgtctttgcccggcccgag
gaaccctgcgagtctttctcgcaatggtggcggcgctgcggcgcagcgcgcgcgccggat
ctggaagccctgcccggcttcctcagcgcgggcgcggcggttccggtgacttga
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