Shinella sp. XGS7: LHJ69_07245
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Entry
LHJ69_07245 CDS
T10581
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
shin Shinella sp. XGS7
Pathway
shin02020
Two-component system
Brite
Transporters [BR:
shin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LHJ69_07245
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UDF36862
LinkDB
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Position
complement(1589274..1592396)
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AA seq
1040 aa
AA seq
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MNLTELFIRRPVMTVLLNIALVIAGLAAWGKIPVAALPSYNTPIINVSASLPGASPETMA
SSVALPLEKQFSTIAGLATISSTSTLGSTSLTLEFDPSRDIDAAAVDVQAALFRSLRALP
TEMTSPPSYRKVNPADAPVLLVALTSPSINLSELNDFAENLITPALSTINGVAQVSIYGQ
KRYAVRVKVRTELLNQRNITLDELQNAIRTANANTPVGVLDGTRQTLTIQANRQLRNAAE
FGAITVATRIGAPVFLRDVAEVQDSYETSKSFSSFNGERSIVLAVQRQPDANTVQVVDAV
KAMLPRFAAQLPASVEMSTLNDRSLSIRESLHDVYFTLALTVALVVLVIFLFLRRMVATL
IPTLSLPISLIGALTLLFALGYSLDNISLLGITLATGLVVDDAIVVLENIHRHVEDGMEP
FAAAIRGAREMAFTILSISISLVAVLIPIFFMPGVIGLLFHEFAVVVSLSILVSAAVSLT
LVPMLCSRFLKPHHAVQENALGRVFEAGFTRLLNAYARSLDLALRHRKAVLAVALASFAA
TVWLYLAIPKGFFPEEDIGQIQATTEASEDISFAAMTVLQERVAAIVQKNAAVASVSASV
GGGGGGGNVNTGRLFINLKPRSERPVMKQVLENLRRELRQVPGIAVYMQPVQNLRLGGRQ
SKSRYQYTLQSVSAGELNTWAQRLQEKLRGDALFRDVTSDSQLRGLQANLLIDRERANLL
GVQMQDLRSALYNAFGERQVSSIYAESNTYQVIMEASEADRLSEDAFSKIYLRGTGGTQV
PLSAFATVQRGLGPTAVNHQGQLQAITLSFNLAPDVPLGDATARLEAYAREIKLPASIIT
SYGGDAAVFQDSQGGQLLLIGLAVAVIYVLLGVLYESYIHPLTILAGLPSAAVGALITLQ
LFGMELTIIATIGILMLIGIVKKNAIMMIDFALDAQRHGGMSPSEAIREACVLRFRPIMM
TTLAALMGALPIAMGLGAGAELRQPLGLAVVGGLILSQAVTLYITPVIYLALDRFSGQGP
DLRPVSATRMSGHGEGAAAD
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaccgagctcttcatccggcggccggtgatgaccgtgctgctgaacatcgcc
ctggtcattgccggcctggcggcctggggcaagatccccgtggcggccctgccctcctac
aacacccccatcatcaacgtctcggccagcctgccgggcgccagcccggagaccatggcc
tcctcggtggccctgccgctggaaaagcagttctccaccattgccggcctggccaccatc
tcctccaccagcaccctgggctccacctcgctgaccctggagttcgacccctcgcgcgat
atcgacgccgcggcggtggatgtgcaggcggcgctgttccgctcgctgcgcgccctgccc
accgagatgacctcgccgcccagctaccgcaaggtgaatccggccgatgcgccggtgctg
ctggtggccctgacctcgccctcgatcaatctctccgagctcaatgactttgccgagaac
ctgatcacgccggccctgtccaccatcaacggcgtggcccaggtctccatctacgggcag
aagcgctacgcggtgcgcgtcaaggtgcgcaccgagctgctgaaccagcgcaatatcacg
ctggacgagctgcagaacgccatccgcacggccaatgccaacacgcccgtgggcgtgctg
gacggcacgcgccagaccctcaccatccaggccaaccgccagctgcgcaatgccgccgag
ttcggcgccatcacggtggccacgcgcattggcgcgccggtctttctgcgcgatgtggcc
gaggtgcaggacagctacgagacctccaagagcttctccagcttcaatggcgagcgctcc
atcgtgctggccgtgcagcgccagcccgatgccaacaccgtgcaggtggtggatgcggtg
aaggccatgctgccgcgctttgcggcccagctgcccgcctcggtggagatgagcacgctc
aacgaccgctccctctccatccgcgaatccctgcacgatgtgtacttcaccctggccctg
accgtggccctggtggtgctggtgatcttcctcttcctgcgccgcatggtggcgacgctg
atccccacgctctccctgcccatctccctgatcggcgccctgaccctgctcttcgccctg
ggctacagcctggacaacatctccctgctgggcatcaccctggcgacgggcctcgtggtg
gacgacgccatcgtggtgctggagaacatccaccgccatgtggaggacggcatggagccc
ttcgccgccgccatccgcggcgcgcgcgagatggccttcaccatcctctccatctccatc
tccctggtggcggtgctgatccccatcttcttcatgcccggcgtgatcggcctgctcttc
cacgagttcgcggtggtggtgtccctgtccatcctggtctcggccgcggtctcgctgacc
ctggtgcccatgctctgcagccgctttctcaagccgcatcacgcggtgcaggaaaacgcg
ctgggccgcgtcttcgaggccggcttcacgcgcctgctgaacgcctatgcgcgcagcctc
gatctggccctgcgccaccgcaaagccgtgctggccgtggccctggccagcttcgccgcc
accgtctggctctatctggccatccccaagggcttcttccccgaggaggacatcggccag
atccaggccaccaccgaggcctcggaagacatctccttcgccgccatgacggtgctgcag
gagcgcgtggccgccatcgtgcagaagaacgccgcggtggccagcgtctcggccagcgtg
ggcgggggcggaggcggcggcaatgtcaacaccggccgactcttcatcaacctcaagccg
cgcagcgagcgccccgtgatgaagcaggtgctggagaacctgcgccgcgagctgcgccag
gtgccgggcatcgccgtctatatgcagccggtgcagaacctgcgcctgggcggccgccag
agcaagagccgctaccagtacaccttgcagtcggtctcggccggcgagctcaacacctgg
gcccagcgcctgcaggagaagctgcgcggcgacgccctgttccgcgacgtcaccagcgac
agccagctgcgcggcctgcaggccaatctgctgatcgaccgcgagcgcgccaacctgctg
ggcgtgcagatgcaggacctgcgcagcgcgctctacaacgcctttggcgagcgccaggtc
tccagcatctatgccgagagcaacacctaccaggtgatcatggaagccagcgaggccgac
cggctcagcgaggacgccttcagcaagatctatctgcgcggcacgggcggcacccaggtg
ccgctctcggccttcgccacggtgcagcgcggcctgggccccacggcggtgaaccaccag
ggccagctgcaggccatcaccctctccttcaacctcgcgcccgatgtgcccctgggcgat
gccacggcgcggctggaggcctatgcccgcgagatcaagctgcccgcctccatcatcacc
agctatggcggcgacgccgcggtcttccaggactcccagggcggccagctgctgctgatc
ggcctggccgtggccgtgatctatgtgctgctgggcgtgctctacgagagctatatccac
ccgctgaccatcctggccggcctgccctcggcggcggtgggcgcgctgatcaccctgcag
ctcttcggcatggagctgaccatcatcgccaccatcggcatcctgatgctgatcggcatc
gtgaagaagaacgcgatcatgatgatcgacttcgcgctggacgcgcagcgccacggcggc
atgagccccagcgaggccatacgcgaggcctgcgtgctgcgcttccgtcccatcatgatg
accacgctggcggccctgatgggcgccctgcccatcgccatgggcctgggcgccggggcc
gagctgcgccagcccctgggcctggccgtggtgggcggcctgatcctgtcgcaggcggtg
acgctctacatcaccccggtcatctacctggcgctggaccgcttcagcggccaggggccg
gacctgcggccggtcagcgccacgcgcatgagcggccatggcgagggcgctgcggccgac
tga
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