Shinella sp. XGS7: LHJ69_07815
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Entry
LHJ69_07815 CDS
T10581
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_07815
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_07815
Transporters [BR:
shin02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LHJ69_07815
Antimicrobial resistance genes [BR:
shin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
LHJ69_07815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UDF36959
LinkDB
All DBs
Position
1701071..1702318
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AA seq
415 aa
AA seq
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MSQHHSPHAPALPPQAGATSPASRSRRLWAAGTALTAIAAVSAAIFGLQSAGAEAPPPAP
QATPVSAAVVQAAEVSTWDEFSGRLEAVERVELRPRVAGTVHAVHFREGALVRQGDLLIT
IDPAPYAAEAERAEAQVAAAQARAANAKTELARAKALLSEQAIAQREFDERSNGLREAEA
NLRAAQAGLQAARLSLGYTQVRAPVSGRVGKLEITVGNQVAAGPGAPLLTTLMSVSPIYA
SFDADEQVIAKALAERSKLERIPVQMGTIAQEGTPLEGRLQLIDNQINAKSGTVRVRAVF
DNKDGQLMPGQFARVRMGAPAKTQALLVNERAVGTDQSKRFVIVVGEGNKAEYREVQLGA
PVNGLRIVAAGLKANERIVVNGLQRVRPGAVLAPKLVAMDAKPEVQAKAATASKS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaccattcaccccacgctcccgcgctcccgccccaggccggcgccacctct
cccgcctcgcgcagccgccgcctctgggccgccggcaccgcgctgacggcgatcgctgcc
gtctcggccgccatcttcggcctgcagagcgcgggcgcggaagcgccgccgcccgcgccc
caggccacgccggtttccgccgccgtggtgcaggccgccgaggtctcgacctgggacgag
ttctcgggccgcctggaagccgtggagcgcgtggagctgcggccgcgcgtggccggcacg
gtgcacgctgtgcacttccgcgagggcgccctggtccgccagggtgatctgctgatcacc
atcgaccccgcgccctatgccgccgaggccgaacgcgccgaggcccaggtggccgcggcc
caggcccgcgccgccaacgccaagaccgagctggcccgcgccaaggccctgctgtccgag
caggcgatcgcgcagcgcgagttcgacgagcgcagcaacggtctgcgcgaggccgaggcc
aatctgcgcgccgcccaggccggcctgcaggccgccaggctgagcctcggctacacccag
gtgcgcgcgccggtctccgggcgcgtgggcaagctggagatcacggtcggcaaccaggtc
gcggccggccccggcgcgcccctgctgaccacgctgatgtcggtgagccccatctacgcc
agcttcgatgccgatgagcaggtcatcgccaaggccctggccgagcgcagcaagctggag
cgcatccccgtgcagatgggcaccatcgcgcaggagggcacgccgctagaaggccgcctg
cagctgatcgacaaccagatcaatgcgaagagcggcacggtgcgcgtgcgcgcggtgttt
gacaacaaggatgggcaactgatgccgggccagttcgcccgggtgcgcatgggcgcgccg
gccaagacccaggccctgctggtcaacgagcgcgcggtcggcaccgaccagagcaagcgt
ttcgtgatcgtggtgggtgagggcaacaaggccgagtaccgcgaggtgcagctgggtgcg
ccggtgaacggcctgcgcatcgtcgcggccggcctcaaggccaatgagcgcatcgtggtc
aacggcctacagcgcgtgcgccccggcgcggtgctggcgcccaagctggtggccatggac
gccaagcccgaggtgcaggccaaggccgccaccgcgagcaagagctaa
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