Shinella sp. XGS7: LHJ69_08605
Help
Entry
LHJ69_08605 CDS
T10581
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shin03000
]
LHJ69_08605
Transcription factors [BR:
shin03000
]
Prokaryotic type
Helix-turn-helix
XRE family
LHJ69_08605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_25
HTH_37
HTH_26
HTH_24
Sigma70_r4
MarR
Motif
Other DBs
NCBI-ProteinID:
UDF37113
LinkDB
All DBs
Position
1869148..1870572
Genome browser
AA seq
474 aa
AA seq
DB search
MRKSFLGVKLKTLREQRGLTQAALAQLLQLSPSYVNQLENNERPLSVSVLLRLQSGLGVD
LQFFSEDEEARLHAQLREIAAESGPPGGVPEAELRTLAQQMPALAQLLLRLQARARGAEQ
RLGDLGALGLAGREGEPLTGPGPHEAVRDFFYAQHNHIDSLDRAAEALAQRLSAEAGQAD
ESAAALAPRLEAYLGRVHGIRVQSVAEAGLRRYLPAARLLQLSEGLNPGQRAFQMGTQLA
YLECEAEIARLLAGAALDAEATALARIGLASYFAGALVLPYGRFLAAAQTLRHDIALLAR
RFGVSFETVCHRLSTLQRREARGLPFFFIRVDRAGNISKRQSATDFHFSRGGGTCPLWTV
YEAFARPGRVLTQLARMPDGRSYLWIAHCEPQAPAAYGAPAREFAVGLGCDLRHAAQLVY
AKGLDLGDPESATPIGPGCKLCEREACAQRAFPALGKRLRIDENERAAQPYAAE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagtcctttctgggcgtcaagctcaagaccctgcgcgagcagcgcggcctgacc
caggcggccctggctcagctgctccagctctcacccagctatgtgaaccagctggagaac
aatgagcgcccgctgagcgtgtcggtgctgctgcgcctgcagtccggcctgggcgtggac
ctgcagttcttctccgaggacgaggaggcccggctgcatgcccagctgcgcgagatcgcg
gccgagagcggcccgcccggcggcgtgcccgaggccgagctgcgcaccctggcccagcag
atgccggccctggcccagctgctgctgcgtctgcaggcgcgggcgcgcggtgccgagcag
cgcctgggcgatctgggcgccctgggcctggccgggcgcgagggcgagcccctgaccggc
cccggcccgcacgaggcggtgcgcgacttcttctatgcccagcacaaccatatcgacagc
ctggaccgggccgccgaggccctggcccagcgcctgagcgccgaggccggccaggccgac
gagagcgcggccgcgctggcgccgcggctggaagcctatctgggtcgggtgcatggcata
cgcgtgcagagcgtggccgaggcgggcctgcgccgctatctgccggctgcgcgcctgctg
cagctctccgagggcctgaacccgggccagcgtgccttccagatgggcacccagctggcc
tatctggagtgcgaggccgagatcgcccgcctgctggccggcgccgcactggatgccgag
gccacagccctggcgcgcatcggcctggccagctactttgccggtgccctggtcctgccg
tatgggcgcttcctggccgcggcccagaccctgcgccacgacatcgccctgctggcgcgg
cgcttcggcgtgagcttcgagaccgtgtgccaccgcctgtccacgctgcagcggcgcgag
gcgcgcggcctgcccttcttcttcatccgggtggacagggccggcaatatttccaagcgc
cagtcggccaccgatttccatttctcgcgcggcggcggcacctgtcccttgtggaccgtg
tacgaggccttcgcgcgcccgggtcgggtgctgacccagctggcgcgcatgcccgacggg
cgcagctatctctggatcgcacattgcgagccccaggcgcccgcggcctacggcgcgccg
gcgcgcgagttcgccgtgggcctgggctgtgatctgcgccatgcggcccagctggtctat
gccaagggcctggatctgggcgacccggagagcgccacgcccataggcccgggctgcaag
ctttgcgagcgcgaggcctgtgcccagcgtgccttcccggccctgggcaagcgcctgcgc
attgatgagaacgagcgtgcggcccagccctatgcggcggagtag
DBGET
integrated database retrieval system
