Shinella sp. XGS7: LHJ69_08660
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Entry
LHJ69_08660 CDS
T10581
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shin03032
]
LHJ69_08660
03036 Chromosome and associated proteins [BR:
shin03036
]
LHJ69_08660
03400 DNA repair and recombination proteins [BR:
shin03400
]
LHJ69_08660
DNA replication proteins [BR:
shin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LHJ69_08660
Chromosome and associated proteins [BR:
shin03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LHJ69_08660
DNA repair and recombination proteins [BR:
shin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LHJ69_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Urease_beta
DUF2530
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UDF37124
LinkDB
All DBs
Position
1885115..1885396
Genome browser
AA seq
93 aa
AA seq
DB search
MNKTELIERIAAKADISRAAAGVALDATLASLSEALVAGDSVSLVGFGTFKVGERAARTG
KNPATGAALEIPASKSARFTPGKALKDALNAKA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccgaactgatcgaacgcatcgccgccaaggccgacatctcccgcgccgct
gctggcgtggccctggacgccaccctggccagcctgtccgaagccctggtggccggtgac
tcggtgtccctggtgggcttcggcaccttcaaggtcggcgagcgcgccgcccgcaccggc
aagaaccccgccaccggcgctgccctggagatcccggcctccaagagcgcccgcttcacg
cccggcaaggccctgaaggacgcactgaacgccaaggcctga
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integrated database retrieval system
