Shinella sp. XGS7: LHJ69_09885
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Entry
LHJ69_09885 CDS
T10581
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shin03400
]
LHJ69_09885
Enzymes [BR:
shin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LHJ69_09885
DNA repair and recombination proteins [BR:
shin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LHJ69_09885
Prokaryotic type
LHJ69_09885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
UDF37355
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Position
complement(2163939..2165372)
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AA seq
477 aa
AA seq
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MSRKTLHQALVWFRRDLRLDDQAALYHALRQARRVFCVFVLDTAILEALPRADRRVQFIL
QALQRLDAQLRAQGGALIVRHGPAAEEIPRLAVELGVQAVFANHDDEPQALARDAAVAQA
LAAQGRAWHSFKDHVIFERSELLTGAGKPYAVFTPYKNAWLKKVDEFYLRAYPVARYAEA
LASHALAQGVPSLADIGFQDAGLAEHLAADKAEALFEDFLHRIDRYDQARDFPAVKGPSY
LSVHLRFGTVSIRRLAREAWQRMAAGERGAEVWLSELIWRDFYHQVMHHWPHAMGGAFRP
EYDKIVWEQGPEAERLFGAWCRGETGYPLVDAAMHQLNSTGYMHNRLRMVTASFLIKDLG
VDWRWGERYFAEQLLDFDLAANNGGWQWAASSGCDAQPYFRIFNPVSQSEKFDPEGRFIR
RYLPQLAALPPKLVHAPWLAGPLEAPDDYAPPLVRHDEARQRTLARYEVVKSRAVKT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaagactttgcaccaagccctggtctggttccggcgcgatctgcgcctggat
gaccaggccgccctttaccacgccctgcgccaggcgcgccgggttttctgcgtcttcgtg
ctggacacggccatcctggaggccctgccccgggccgaccgccgggtccagttcatcctg
caggccctgcagcggctggacgcgcagctgcgtgcgcagggcggcgccctgatcgtgcgc
cacggcccggccgccgaggagatcccgcgcctggcggtcgagctgggcgtgcaggccgtg
ttcgccaaccatgacgacgagccccaggccctggcccgcgacgccgccgtggcccaggcc
ctggccgcccagggccgcgcctggcacagcttcaaggaccatgtgatcttcgagcgcagc
gagctgctcaccggcgccggcaagccctatgccgtgttcacgccctacaagaacgcctgg
ctcaagaaggtggacgagttctacctgcgcgcctacccggtggcgcgctacgccgaggcc
ctggcctcccatgccctggcgcaaggcgtgcccagcctcgcggacatcggtttccaggac
gccggcctggccgagcatctggcggccgacaaggccgaagccttgttcgaggacttcttg
caccgcattgaccgctacgaccaggcccgcgacttcccggccgtgaagggccccagctat
ctgagcgtgcacctgcgtttcggcacggtctcgatccgccgcctggcgcgcgaggcctgg
cagcgcatggccgcgggcgagcgcggcgccgaggtctggctctcggagctgatctggcgc
gacttctaccaccaggtcatgcaccactggccccatgccatgggcggcgccttccgcccc
gagtacgacaagatcgtctgggaacagggccccgaggccgagcgcctttttggcgcctgg
tgccgcggcgagaccggctaccccctggtggacgccgccatgcaccagctcaacagcacc
ggctatatgcacaaccgcctgcgcatggtgacggccagcttcctgatcaaggacctgggc
gtggactggcgctggggcgagcgctacttcgccgaacagctgctggacttcgacctggcc
gccaacaacggcggctggcaatgggccgcctccagcggctgcgacgcccagccctatttc
cgcatcttcaaccccgtgagccagagcgagaagttcgaccccgagggccgcttcatccgc
cgctacctgccccagctggccgccctgccccccaagctggtgcacgcgccctggctggcc
gggccgctggaggccccggacgactacgccccgcccctggtgcgccatgacgaagcgcgc
cagcgcacccttgcgcgctacgaggtggtgaagtcacgggcggtgaagacctga
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