Shinella sp. XGS7: LHJ69_10035
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Entry
LHJ69_10035 CDS
T10581
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shin03021
]
LHJ69_10035 (rpoH)
Transcription machinery [BR:
shin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LHJ69_10035 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
DUF2390
HTH_3
Myo5a
Motif
Other DBs
NCBI-ProteinID:
UDF37384
LinkDB
All DBs
Position
complement(2188964..2189881)
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AA seq
305 aa
AA seq
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MSNPTALAVRDPWALVPSLGNLDAYISAVNRLPMLTPEEELSFARRLREHGDLEAAGRLV
LSHLRLVVSISRQYLGYGLPQGDLIQEGNVGLMKAVKRYDPEQGVRLVSYAMHWIKAEIH
EYILKNWRMVKVATTKAQRKLFFNLRSMKHSLKEEAAEGQTHRNTLTESELEHVARELNV
KREEVLEMETRMAGGDVALEPQGDDDGEQAFAPIAYLADESHEPTRVLESRSRDELAGTG
IARALEALDERSRRIVEERWLKVNDDNSGGMTLHELAAEYGVSAERIRQIEVAAMKKMKK
ALVAA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccccaccgcactggctgttcgtgacccctgggccctggtgccctcgctgggc
aatctggacgcctatatctcggccgtcaatcgcctgccgatgctgacgcccgaggaggag
ctgtcctttgcccgccgcctgcgcgaacacggtgatctggaggccgccggccgcctggtg
ctctcgcacctgcgcctggtggtttcgatctcgcgccagtacctgggctacggcctgccc
cagggtgacctgatccaggaaggcaatgtgggcctgatgaaggccgtcaagcgctatgac
cccgagcagggcgtgcgcctggtcagctatgccatgcactggatcaaggccgagatccac
gagtacatcctgaagaactggcgcatggtcaaggtcgccacgaccaaggcccagcgcaag
ctcttcttcaatctgcgctccatgaagcacagcctcaaggaagaggcggccgagggccag
acccaccgcaacacgctcaccgaaagcgagctggagcatgtggcgcgcgagctgaacgtc
aagcgcgaggaagtgctggagatggaaacccgcatggcgggtggcgacgtggccctggag
ccccagggcgacgacgatggcgagcaggccttcgcccccatcgcctacctggcggacgag
agccatgagcccacccgcgtgctggaatcccgcagccgtgacgagctggccggcaccggc
atcgcccgcgccctggaggcgctggacgagcgcagccgccgcatcgtggaagagcgctgg
ctgaaggtgaatgacgacaactcgggcggcatgaccctgcacgagctggcggccgagtac
ggtgtgtccgccgagcgcatccgccagatcgaggtggccgccatgaagaagatgaagaag
gccctggtcgccgcctga
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