Shinella sp. XGS7: LHJ69_10430
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Entry
LHJ69_10430 CDS
T10581
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K10195
oligogalacturonide transport system ATP-binding protein
Organism
shin Shinella sp. XGS7
Pathway
shin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LHJ69_10430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_10430
Transporters [BR:
shin02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Oligogalacturonide transporter
LHJ69_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
OB_MalK
TOBE_2
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
Rad17
nSTAND3
AAA_25
ORC-CDC6-like
NACHT
AAA_23
AAA_28
AAA
NB-ARC
MMR_HSR1
AAA_30
AAA_5
AAA_33
AAA_15
AAA_17
ATPase_2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UDF37761
LinkDB
All DBs
Position
2276674..2277792
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AA seq
372 aa
AA seq
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MSLNKIEKVYPNGFKAVHGIDLEVADGEFVALVGPSGCGKSTLLRMIAGLEGITGGDILI
GARPSTIWRRTRDIAMVFQNYALYPHMTVRQNLAYGLKLAHTPKAEVDQRVRQAARLLEM
EHLLDRYPKQLSGGQAQRVAVGRAIVKKPDVFLFDEPLSNLDAKLRANMRVRLTELHRTL
RESGQPATTIYVTHDQVEAMTMGDRIAVLKEGVIQQVDTPTALYDRPANAFVASFIGSPE
MNIHDARLQALDDGLAVLLGGQVLPLPVAKAAKLQGRPAGAASIKFGLRPEHVSVLPRPG
ATQVQGTLRFTEHMGSEIFVHFDIGDVPMSARVPADQLGDLVAQPRGTPHAFWLQLAQAH
VFDAASGANLLL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ctgagcctcaacaagatagaaaaggtctaccccaacggcttcaaggccgtgcacggcatc
gacctcgaggttgcggacggcgagttcgtcgcgctggtcggcccgtccggctgcggcaag
tccacgctgctgcgcatgatcgccggcctcgagggcatcaccggcggcgatatcctgatc
ggcgcgcgaccgtcaacgatctggcgccgaacgcgtgacatcgccatggtgttccagaac
tatgcgctctacccgcatatgacggtgcgccagaaccttgcctatggcctgaagctggcg
cacacgcccaaggccgaggtggaccagcgcgtgcgccaggccgcgcgcctgcttgagatg
gagcatctgctggaccgctatcccaagcagctcagcggcggccaggcccagcgcgtggcc
gtgggccgggccatcgtcaagaagcccgatgtgttcctgtttgacgagcccctgtccaac
ctggatgccaagctgcgcgccaatatgcgcgtgcgcctgaccgagctgcaccgcaccctg
cgcgagtcgggccagcccgccaccaccatctacgtcacgcacgaccaggtcgaggcgatg
acgatgggcgaccgcatcgccgtgctcaaggaaggcgtgatccagcaggtggacacgccc
accgcgctgtacgaccgcccggccaatgcctttgtggccagcttcatcggttcgcccgag
atgaacatccacgacgcgcgcctgcaggccctggacgatggcctggccgtgctgctgggc
ggccaggtcctgcccctgccggtggccaaggcggccaagctgcaagggcggccggcgggc
gccgcatccatcaagttcggcctgcggcccgagcatgtctcggtgctgccgcgccccggc
gccacccaggtgcagggcacgctgcgtttcaccgagcacatgggcagcgagatcttcgtg
cacttcgacattggtgatgtgcccatgagcgctcgcgtgccggccgatcagctgggtgat
ctggtcgcgcagccgcgcggcacgccgcatgccttctggctgcagctggcccaggcccat
gtcttcgatgccgccagcggcgccaatctcctgctgtga
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