Shinella sp. XGS7: LHJ69_10445
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Entry
LHJ69_10445 CDS
T10581
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shin Shinella sp. XGS7
Pathway
shin00040
Pentose and glucuronate interconversions
shin01100
Metabolic pathways
shin02024
Quorum sensing
Brite
Enzymes [BR:
shin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LHJ69_10445
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Other DBs
NCBI-ProteinID:
UDF37459
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Position
2280384..2282747
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AA seq
787 aa
AA seq
DB search
MRRAALALCLVTTALSTQAQAVLRPQLTAEQAARHQAADYLQGWRPQPLDVRAWWPDWIV
AADGSGTHRTVQAALDALPAAEAGEGRRRYILVKPGVYRESLCARGKAPFTLYGDPAAPR
PTLVEGRYSAQPKPVGQAVNACVGAAEAASYGTAGSASVALIGEGIQLLHLRIFNDAMDG
VRLGQGYPPGAGERGGAQAVALLLQGDRHQLQQLELLGHQDTFYVAREAQRPGPARVHVR
DSLIAGDVDFIFGNASLVIEGGTVLSRAGRRAPGEPGHVLAPSTLTSEPYGFLLSGVRMR
AEPGLQDGSASLGRAWDQGVKPGTWPADLPAAARPNGQALIRDSELGPHLGPWAASTARR
PFEAGINRLSEFNNRAAPRDWGRERLALDDGWAAAEGGTTGGSAAAPEDVYEVYNRAELE
RALAAGSRPKIIRLHRRIDLSRDAQDRPLGYEDYRDPDFDFQAYVQAFDPARWGRRAPEG
PQEEARKRSARRQAERVVLRLPSNTTLIGVGPEAGFINGMLLLERVQNLILRGLHFADAY
DFFPAWDPNDNAAGEWNSEYDTLSLRGARHVWIDHCSFDDGPRVDGQARVALGRPLQHHD
GLLDITQQSDLVTVSWNRFSSHDKTTLVGGSDAHRQDEGRLRVSFHHNLWEAVKERTPRV
RYGQVHLYNNLFVGRSAAAGGGDYAYGYSIGVGLRSRIVSEANVFETSPDIPSRQLVRLL
KGQGLRDRGSLHNGRPIDLMALLREVHPEAALIDEPGWSPLLRGPLDPAEAVAQRVRAGA
GAIIQAN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgagccgcgctggcgctctgcctggtgaccaccgcgctgagcacacaggcccag
gctgtgctgcggccgcagctgacggccgagcaggccgcgcgccatcaggcggcggactat
ctgcagggctggcggccgcagcccctggatgtccgtgcctggtggccggactggatcgtg
gcggccgatggcagcggcacacaccgcacagtgcaggctgcgctcgatgcgctgccggcc
gccgaggccggggaggggcggcggcgctacatcctcgtcaagccgggcgtgtaccgcgag
tcgctgtgtgcccgcggcaaggcgccgttcacgctctacggcgatccggccgcgccgcga
cccaccctggtggaggggcgctacagcgcccagcccaagccggtggggcaggcggtgaat
gcctgcgtgggcgcggccgaggctgcgagctacggcacggccggcagcgccagcgtggcc
ctgatcggcgagggtatccagctgctgcacctgcgcatcttcaatgacgcgatggacggt
gtgcgcctgggccagggctatccgcccggcgcgggcgagcgcggcggcgcccaggccgtg
gccctgctgctgcagggcgatcgccaccagctgcagcagctggagctgctgggccatcag
gacaccttctacgtggcccgcgaggcgcagcgtccggggccggcccgcgtccatgtgcgc
gacagcctgatcgccggcgatgtggatttcatcttcggcaatgccagcctggtgatcgag
ggcggcaccgtgctcagccgcgccggccgccgcgcgccgggcgagcccggccatgtgctg
gcgcccagcaccctgacgagcgagccctatggcttcttgctcagcggcgtgcgcatgcgg
gccgagcccggcctgcaggacggcagcgcctccctgggacgcgcctgggatcagggcgtg
aagcccggcacctggcccgccgatctgccggccgccgcacggcccaacggtcaggccctg
atccgtgacagcgagctggggccgcatctggggccctgggcagccagcaccgcgcgccgc
cctttcgaggccggcatcaaccgcctgagcgaattcaacaaccgcgccgccccacgcgac
tggggtcgcgaacgcctggcgctggatgatggctgggccgcggcggagggcggcaccacg
ggcggcagcgcggcggcgcccgaggatgtatacgaggtctacaaccgcgccgagctcgag
cgggcgctggcggcgggcagccggcccaagatcatccgcctgcaccgccgcatcgacctc
agccgcgacgcgcaggaccggccgctgggctatgaggattaccgcgaccccgacttcgac
ttccaggcctatgtgcaggcctttgaccccgcgcgctggggccggcgtgcgcccgagggc
ccgcaggaagaggcgcgcaagcgctcggcgcggcgccaggccgagcgcgtggtgctgcgc
ctgccctccaacaccacgctgatcggtgtgggcccggaggccggcttcatcaacggcatg
ctgctgctggagcgggtgcagaacctgatcctgcgcggcctgcatttcgctgatgcctac
gacttcttccccgcctgggacccgaatgacaacgcggcgggcgagtggaactcggagtac
gacaccctgtccctgcgcggtgcccgccatgtgtggatcgaccattgcagctttgacgac
ggcccgcgcgtggacggtcaggcccgtgtggccctgggccgtcccctgcagcatcacgat
gggctgctggacatcacccagcagtccgacctggtcaccgtgtcctggaaccgcttcagc
agtcacgacaagaccaccctggtgggcggcagcgacgcccaccgccaggacgagggccgg
ctgcgtgtgagcttccatcacaacctttgggaggcggtgaaggagcgcacgccgcgggtg
cgctacggccaggtccatctctacaacaacctcttcgtcgggcgcagcgccgcggccggc
ggcggggactatgcctatggctactccatcggcgtgggcctgcgctcgcgcatcgtgagc
gaggccaatgtcttcgagacctcgcccgacattcccagccgccagctcgtgcgcctgctc
aagggtcagggcttgcgtgaccgtggttccctgcacaacggccggcccatcgatctgatg
gccctgctgcgcgaggtccatcccgaggccgcgctgatcgacgagccggggtggagtccc
ttgctgcgcggcccgctggacccggccgaggccgtggcgcagcgggtgcgcgccggcgcc
ggtgcaataatccaggccaattga
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