Shinella sp. XGS7: LHJ69_11325
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Entry
LHJ69_11325 CDS
T10581
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
shin Shinella sp. XGS7
Pathway
shin03420
Nucleotide excision repair
Brite
Enzymes [BR:
shin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LHJ69_11325
Transcription machinery [BR:
shin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LHJ69_11325
Chromosome and associated proteins [BR:
shin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LHJ69_11325
DNA repair and recombination proteins [BR:
shin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LHJ69_11325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UDF37619
LinkDB
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Position
complement(2468822..2471119)
Genome browser
AA seq
765 aa
AA seq
DB search
MPAAYTVAVRELCEFTAKSGDLDLRFTPAPTAQEGIAGHAAVAQGRGAGYQTELSLAGEY
QGPDCVLHVRGRADGYRPQQRRLEEIKTFKGSLESQPASHRALHWAQLRIYGWLLCQQES
LDELELALVYYDIGKQRETVFTERLGAVQLQAFFEQHCHAFLAWAGLQLAHRAARDAVLA
GLSFPFGEFRAGQRALAEGVFKTARAGRCLLAQAPTGIGKTLGTLFPLLKAAPGGPLDKL
FFLAAKTSGRQLALDALARLPARPLRVLELVARDKACEHPDKACHGESCPLAAGFYDRLP
AARAAACAQDLALNQAQVREIARQHQVCPYYLSQELVRWADVVVGDYNYYFDLSALLHGL
SQANGWRVGLLVDEAHNLVERGRKMYTAELLGESLEAARRGPAALAHAPVKKALDKLRRA
WSALDKADAQARPYRVFEAFPEPLLQALQQCGSALTEHFTEHPAEPDPALQAFYFEAQHM
VRLAELFDSHSIVDATRPEPRGRMKPGLSTLTLRNLVPAPFLRPRLQAAHTSTLFSATLQ
PMDYYANLLGLPEDCLRLEVDSPFAAAQLQVQIAGRISTRYADRQASLAPIVALMAAQYT
RQPGNYLAFFSSYEYLQQAFELLQREHPDLPCWAQSRRMGEGEQRDFLARFSDSSQGIGF
AVLGGAFSEGIDLPGRRLIGAFVATLGLPQINPVNEQIRARMQQLFGAGYDYTYLYPGLQ
KVVQAAGRVIRTVSDQGVVHLIDDRYARREVQALLPRWWTLQAGS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagcctacacggtggccgtgcgcgagctgtgcgagttcacggccaagagcggt
gacctggacctgcgcttcacgcccgcccccacggcccaggaaggcatcgccggccatgcc
gccgtggcccagggccgcggcgccggctaccagaccgagctgagcctggccggtgagtac
cagggccccgactgcgtgctgcacgtgcgcggccgcgccgacggctaccggccgcagcag
cggcggctggaagagatcaagaccttcaagggcagcctcgaatcccagcccgcctcgcac
cgcgcgctgcactgggcccagctcaggatctatggctggctgctgtgccagcaggagtcg
ctggacgagctggagctggccctggtctattacgacatcggcaagcagcgcgagaccgtc
ttcaccgagcgcctgggcgccgtgcagctgcaggccttcttcgagcagcactgccacgcc
tttctggcctgggccggactgcagctggcccaccgcgcggcacgcgatgcggtgctggcc
ggcctgagctttcccttcggcgagttccgcgccggccagcgggctctggccgagggtgtg
ttcaagaccgcacgcgccggccgctgcctgctggcccaggcgcccaccggcattggcaag
accctgggcaccctcttccccctgctcaaggcggcccccggcggcccgctggacaagctc
ttcttcctggccgccaagacctcgggccggcagctggcgctggacgcgctggccaggctg
cccgcccggccgctgcgcgtgctggagctggtggcgcgcgacaaggcctgcgagcacccc
gacaaggcctgccatggcgagtcctgcccgctggcggccggcttctatgaccggctgccg
gccgcgcgcgccgcggcctgcgcgcaagacctggccctcaaccaggcgcaggtgcgcgag
atcgcgcgccagcaccaggtctgtccctactacctgagccaggagctggtgcgctgggcc
gatgtggtggtgggcgactacaactactacttcgacctcagcgccctgctgcacggtctg
agccaggccaatggctggcgcgtcggcctgctggtcgacgaggcccacaatctggtggag
cgcggccgcaagatgtacacggccgagctgctgggcgagagcctggaggccgcgcgccgc
ggccccgccgccctcgcccatgcgccggtcaagaaggcgctggacaagctgcgccgcgcc
tggagtgcgctggacaaggccgatgcgcaggcgcgcccctaccgcgtcttcgaggccttt
cccgagcccctgctgcaggccctgcagcaatgcggcagcgcactcaccgagcacttcacc
gagcaccccgcggagccggacccggccctgcaggccttctacttcgaggcccagcacatg
gtgcgcctggccgagctgttcgacagccactccatcgtcgacgccacccgccccgagccg
cgcggccgcatgaagccgggcctgtccacgctcaccctgcgcaatctggtgcccgccccc
ttcctgcggccgcggctgcaggcggcgcacaccagcaccttgttctcggccaccctgcag
cccatggactactacgccaatctgctgggcctgcccgaggactgcctgcgcctggaggtg
gactcgccctttgcggccgcccagctgcaggtgcagatcgccggccgcatctccacccgc
tacgcggaccgccaagcctcgctggcgcccatcgtggccctgatggccgcgcagtacacc
cggcagcccggcaactacctggccttcttcagcagctacgagtatctgcagcaggccttc
gagctgctgcagcgcgagcacccggacctgccctgctgggcccagtcgcgccgcatgggc
gagggcgagcagcgcgacttcctggcccgcttctcggacagcagccagggcataggcttc
gcggtgctgggcggcgccttctccgagggcatcgacctgccgggccggcgcctgatcggt
gccttcgtcgccaccctgggcctgccccagatcaacccggtcaacgagcagatccgcgcg
cgcatgcagcagctcttcggcgccggctatgactacacctacctctaccccggcctgcag
aaagtggtgcaggccgctggccgcgtgatccgcacggtcagcgaccagggtgtggtgcac
ctgatcgacgaccgctatgcgcggcgcgaggtgcaggccctgctgccgcgctggtggacg
ctacaggccggctcttga
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