Shinella sp. XGS7: LHJ69_11535
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Entry
LHJ69_11535 CDS
T10581
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
shin Shinella sp. XGS7
Pathway
shin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LHJ69_11535 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shin03400
]
LHJ69_11535 (xseB)
Enzymes [BR:
shin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LHJ69_11535 (xseB)
DNA repair and recombination proteins [BR:
shin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LHJ69_11535 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
UDF37659
LinkDB
All DBs
Position
2510880..2511125
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AA seq
81 aa
AA seq
DB search
MTKATAKNASRDAVSPSYEQALEELERLVASMEGGQLPLDQLLDSYRRGAELLGFCRARL
QAVEQQVKVLEGGEMKSWEDS
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagccaccgccaagaatgcgtcccgggacgccgtttcgcccagttacgagcaa
gcgctcgaggaactggagcgcctggtagcgtccatggaaggcggccagctgccgctggac
cagctgctggacagctatcggcggggggcagagttgctcggcttctgccgcgcgcgcctg
caggccgtagaacaacaggtgaaggtactggagggcggggaaatgaagtcgtgggaggac
tcttaa
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