Shinella sp. XGS7: LHJ69_11555
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Entry
LHJ69_11555 CDS
T10581
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shin Shinella sp. XGS7
Pathway
shin00300
Lysine biosynthesis
shin00470
D-Amino acid metabolism
shin01100
Metabolic pathways
shin01110
Biosynthesis of secondary metabolites
shin01120
Microbial metabolism in diverse environments
shin01230
Biosynthesis of amino acids
Module
shin_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LHJ69_11555 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LHJ69_11555 (lysA)
Enzymes [BR:
shin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LHJ69_11555 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UDF37663
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Position
2514996..2516246
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AA seq
416 aa
AA seq
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MPRPVSAPLLWNLAERFGTPLWVYDAALIRSRIAALQAFDTIRFAQKACSNTHILKLMRE
QGVKVDAVSRGEILRALAAGYRAGADGEIVFTADLLDRETLATVAEHRVPVNAGSIDMLG
QLAAVSPGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELGAALDVIRAQGLKLVGL
HMHIGSGVDYGHLAQVCGAMVDLVRQAHEAGHDLQAISAGGGLSIPYREGGAVIDTAHYF
GLWDAARQQAEALLGHGLHLEIEPGRFLVAEAGLLLAEVRATKNAGANHFVLVDAGFNEL
MRPAMYGAFHAMEILPRDGVARPQRPSVVAGPLCESGDVFTQEDGGVVVPRDLAEARVGD
LLLIHDTGAYGASMSSNYNSRPLIAEVLVEGDDPASARLIRRRQTVEELLALESGL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcccgtctccgcccccctgctctggaatctggccgaacgcttcggcaccccc
ctctgggtctatgacgcggccctcatccgcagccggatcgcggcgctccaggccttcgac
accatccgcttcgcgcagaaggcctgctccaacacccatatcctcaagctgatgcgcgag
cagggggtgaaggtggatgccgtctcgcgcggcgagatcctgcgcgccctggccgccggc
taccgcgccggcgcggatggcgagatcgtcttcaccgccgatctgctggaccgcgagacc
ctggccaccgtggccgagcaccgcgtgccggtgaatgccggttccatcgacatgctgggc
cagctggccgcggtctcgcccggtcacccggtctggctgcgcatcaaccccggcttcggc
catggccacagcaacaagaccaataccggcggcgagcacagcaagcacggcatctggcat
agcgagctgggcgccgcgctggacgtgatccgcgcccagggcctgaagctggtcggcctg
cacatgcacatcggttcgggcgtggactatggccatctggcccaggtctgcggcgccatg
gtggacctggtgcgccaggcccacgaggccggccacgatctgcaggccatctcggccggc
ggcgggctctccattccctaccgcgagggcggggcggtgatcgacacggcccattacttc
ggcctctgggacgcggcccgccagcaggccgaggccctgctgggccatggcctgcatctg
gagatcgagccgggccgcttcctggtggccgaggccggcctgctgctggccgaggtgcgc
gcgaccaagaacgcgggcgccaaccacttcgtgctggtggatgccggcttcaacgagctg
atgcgccccgccatgtacggcgccttccacgccatggagatcctgccgcgcgacggcgtg
gcgcgtccccagcgccccagcgtggtggccgggccgctgtgcgaatcgggcgatgtcttc
acccaggaagacggcggcgtggtggtgccgcgcgacctggccgaggcgcgggtgggcgat
ctgctgctgatccatgacaccggcgcctacggtgcctccatgtccagcaactacaacagc
cgccccctgatcgccgaagtgctggtggagggcgatgaccccgcctcggcccgcctgatc
cgccgccgccagacggtggaggagctgctggccctggaatccgggctctga
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