Shinella sp. XGS7: LHJ69_12295
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Entry
LHJ69_12295 CDS
T10581
Name
(GenBank) diguanylate cyclase
Organism
shin Shinella sp. XGS7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Cas10-Cmr2_palm2
Mod_r
AAA_13
GGDEF_2
Sec8_N
DUF1664
COG5_N
5_nucleotid
Motif
Other DBs
NCBI-ProteinID:
UDF33406
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Position
complement(2692880..2694811)
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AA seq
643 aa
AA seq
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MDDTRRPPTSRLGLPPAQVAKAALRRLALSKQEPTPENYAAAYAAESGGAAPAPAASGAS
ETLPERAQQLLQRLMSLGIGDGQTRLEIGGLVREARWDEALRRVERLQASEGPSVQAEAM
ASTLERLVRGLERGGRQWTVARKKDGLQRVLSSNRSDPQRLLSRLRQLLQNWDSDVADAS
VDTQFDADESGGTPSQFFTDSEFASDLDQEAAPASAAAPLGAAAGPGGGLPSLSTLGTDP
SLPHWLRIETSLEGTVEHALRAPDGNADGVAGQLLAELQAAQAEALARGADAPRAEAFEA
LSQRARHLLDHRQHLFGELGELCRELSASLVDLSEDDSWARGQCEAMSNTLDQGLSARGV
RSVSELLHNTRDRQRSLREERSRARDSLKSLIHKMLAELGELGQHTDRFQSSVGRYAEVI
EQADSLESLAGVVREMVEESRSVQALVRQTQERLSAEHEKASALSERVQNLEGELKRLSD
EVQTDQLTQIANRRGLIAAFGIEQAKQERDDSALALALLDIDNFKKLNDTLGHAAGDEAL
KSLASQVSALLRPGDMMARYGGEEFVLMLPRTPLDEAQQVLTRLQRALTKALFMHEGKDV
FVTFSAGVTLYRPGETLEAALDRADVALYEAKHTGKNKACVAP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacacgccgcccccccacgagccggctgggactgccgccggcccaggtggcc
aaggccgccctgcgccgcctggccctctccaagcaggaacccacgcccgagaactacgcc
gccgcctatgcggccgagtccggcggcgcggcgcccgcccccgccgccagtggcgccagc
gagaccctgcccgagcgcgcccagcagctgctgcaacgcctgatgtccctgggcattggc
gatggccagacccggctggagatcggcggcctggtgcgcgaggcgcgctgggacgaggcc
ctgcgccgcgtggagcgcctgcaggccagcgaaggccccagcgtgcaggccgaggccatg
gccagcacgctggagcgcctggtgcgcggcctggagcgcggcggccggcaatggaccgtg
gcgcgcaagaaagacgggctgcagcgcgtgctctccagcaaccgcagcgacccgcagcgc
ctgctcagccgcctgcgccagctgctgcaaaactgggacagcgacgtggccgacgccagc
gtcgacacccagttcgacgccgatgagtcgggcggcacgcccagccagttcttcaccgac
agcgaattcgcctccgacctggaccaggaggccgcgcccgccagcgcggcggcaccgctc
ggcgctgccgccggccccggcggcggcctgcccagcctctccaccctgggcaccgacccc
agcctgccgcactggctgcgcatcgagaccagcctggaaggcacggtggagcacgccctg
cgcgcccccgacggcaatgccgacggcgtggccggccagctgctggccgagctgcaggcc
gcccaggccgaggccctggcccgtggcgccgatgccccgcgggccgaggccttcgaagcc
ctgagccagcgcgcccgccatctgctggaccatcgccagcatctctttggcgagctgggc
gagctctgccgcgagctcagcgccagcctggtggacctctcggaggacgactcctgggcc
cgtggccagtgcgaggccatgagcaacaccctggaccagggcctctccgcccggggcgtg
cgttcggtcagcgagctgctgcacaacacccgcgatcgccagcgcagcctgcgtgaggaa
cgcagccgcgcccgcgactcgctcaagtccctgatccacaagatgctggccgagctgggc
gagctgggccagcacaccgaccgcttccagagcagcgtgggccgctatgccgaagtcatc
gagcaggccgactccctggaaagcctggccggcgtggtgcgcgagatggtggaggaaagc
cgcagcgtccaggccctggtgcgccagacccaggaacgcctgagcgccgagcatgagaag
gccagcgcgctcagtgagcgggtccagaacctggagggcgagctcaagcgcctctccgac
gaggtgcagaccgaccagctcacccagatcgccaaccgccgcggcctgattgccgccttc
ggcattgagcaggccaagcaggagcgcgacgacagcgccctggccctggccctgctggac
atcgacaacttcaagaagctcaacgacaccctgggacatgccgcgggcgacgaggccctg
aagtcactggccagccaggtctcggccctgctgcgccccggcgacatgatggcccgctac
ggcggcgaggagttcgtgctcatgctgccccgcaccccgctggacgaagcccagcaggtg
ctcacccggctgcagcgcgccctgaccaaggccctgttcatgcacgagggcaaggacgtg
ttcgtcaccttctccgccggcgtgacgctctaccgccccggcgaaaccctggaagccgcc
ctggaccgcgccgacgtggcgctgtatgaggccaagcacacggggaagaacaaggcgtgc
gtggcgccgtga
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