Shinella sp. XGS7: LHJ69_12975
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Entry
LHJ69_12975 CDS
T10581
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shin03009
]
LHJ69_12975 (rimO)
Enzymes [BR:
shin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LHJ69_12975 (rimO)
Ribosome biogenesis [BR:
shin03009
]
Prokaryotic type
ribosomal protein modification factors
LHJ69_12975 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UDF33536
LinkDB
All DBs
Position
2828448..2829836
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AA seq
462 aa
AA seq
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MSTEIAPEKKRAPSIGFVSLGCPKALTDSELILTQLRAEGYETSKTFAGADLVIVNTCGF
IDDAVKESLDTIGEALAENGKVIVTGCLGAKAGQAGGDNLIREVHPSVLAVTGPHATQEV
MDAVHTHVPKPHDPFVDLVPAQGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRP
IGDVLNEARALFEAGVKELLVISQDTSAYGVDVKYRTGFWDGTPVKTKLFDLVARLGELA
KAHGAWVRLHYVYPYPHVDEILPLMAEGLILPYLDVPLQHAHPDVLKRMKRPANGEKNLE
RIQRWREICPEIVIRSTFIAGFPGETEAEFQYLLDFMQEARIDRAGCFAYSPVEGATANE
LPGAVDEAVREARRAQFMEVAERVSAAKLRERIGATMQVLVDSAPALGRKGGLGRSYADA
PEIDGTVRLLPPEKASKTLKVGEFTRARIVAAEGHDLVAMPI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgaaatcgcccccgaaaagaagcgcgcgccgagtataggattcgtatcctta
ggatgccccaaggccctgaccgactccgagctcatcctcacccagctgcgggccgagggc
tatgagacctccaagacctttgccggtgcggatctggtgatcgtcaacacctgcggcttc
atcgacgacgcggtcaaggagagtctggacaccatcggcgaggccctggccgagaatggc
aaggtcatcgtgaccggctgcctgggcgccaaggccggccaggccggcggcgacaacctg
atccgcgaggtgcatcccagcgtgctggccgtgaccggcccgcacgccacccaggaggtg
atggatgcggtgcacacccatgtgcccaagccccacgacccctttgtggacctggtgccg
gcccagggcatcaagctcacgcccaagcactacgcttatctgaagatcagcgagggctgc
aaccaccgctgcagcttctgcatcatccccagcatgcgcggcgatctggtctcgcgaccc
atcggcgatgtgctcaacgaggcccgcgccctgttcgaggccggcgtcaaggagctgctg
gtcatcagccaggacaccagcgcctatggcgtggacgtgaagtaccgcaccggcttctgg
gacggcacgccggtcaagaccaagctcttcgacctggtggcccgtctgggcgagctggcc
aaggctcatggcgcctgggtgcgcctgcactacgtctacccctatccgcatgtggacgag
atcctgcccctgatggccgagggtctgatcctgccctatctggacgtgcccttgcagcat
gcccaccccgatgtgctcaagcgcatgaagcgcccggccaatggcgagaagaacctggag
cgcatccagcgctggcgcgagatctgccccgagatcgtgatccgctccaccttcatcgcc
ggcttccccggcgagacggaagccgagttccagtacctgctggacttcatgcaggaggct
cgcatcgaccgtgcaggctgctttgcctactctcccgtggagggcgccaccgccaacgag
ctccccggcgccgtggacgaggccgtgcgcgaggcgcgccgcgcccagttcatggaagtg
gccgagcgggtctcggccgccaagctgcgcgagcgcatcggcgccaccatgcaggtgctg
gtggactccgccccggccctgggccgcaagggcggcctgggtcgcagctatgccgacgcg
cccgagatcgacggcaccgtgcgcctgctgccgcccgagaaggccagcaagacgctcaag
gtgggcgagttcacgcgtgcgcgcatcgtcgcggccgaggggcacgatctggtggccatg
cccatctga
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