Shinella sp. XGS7: LHJ69_13015
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Entry
LHJ69_13015 CDS
T10581
Name
(GenBank) MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_13015
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_13015
Transporters [BR:
shin02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LHJ69_13015
Antimicrobial resistance genes [BR:
shin01504
]
Gene variants
Tetracycline resistance genes
Transporters
LHJ69_13015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_4
Motif
Other DBs
NCBI-ProteinID:
UDF33544
LinkDB
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Position
2835707..2836978
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AA seq
423 aa
AA seq
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MTEPVPPTDPATKHGGRKAAMSFILVAVLIDMISIGLIIPVLPPLVGTFAKTPAEHTLAY
LAVSFAFGIANFFGSPILGALSDRFGRRPVLLIGFSGLALSFLVTASATALWMLIVVRLF
SGAMQANAAVANAYVADITPPAERAKRFGMLGAAFGMGFILGPVMGGLLGDIDLHLPFYV
AGGLALLNWLYGFFVLPESLPAEHRRPFEWKSANPVSALKKLSALKGVGSLVFVIGLSGL
AQLMVHTTWVIYTGIKFGWGPKENGLSLFAVGAMAVLVQGFLLPRLLKRFSPQRLVVWGL
ASSVITNFVWGAATEGWMMYAIIAFNILGFAASTAMQSLVSNAADAKTQGQTMGAVSSLN
SVMAVLAPVLGMGLMYLVAELPRGDWRIGAPFYFCALLQTASLFFAWRHFGRQANPVPLA
RAS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagccggtgccccccaccgacccggcaacgaagcatggcggccgcaaggccgcc
atgtccttcatcctggtcgccgtgctgatcgacatgatctcgatcggcctgatcatcccg
gtgctgccgccgctggtgggcacttttgccaagactccggccgagcacaccttggcctat
ctggcggtgagctttgccttcggcattgccaacttctttggctcgcccatcctgggggcg
ctgtccgaccgcttcgggcgccgcccggtgctgctgatcggcttctcgggcctggccctg
agctttctggtcacggcctcggccaccgcgctgtggatgctgatcgtggtgcgcctgttc
tcgggcgccatgcaggccaatgcggccgtggccaatgcctatgtggccgacatcactccg
ccggccgagcgcgccaagcgcttcggcatgctgggtgcggccttcggcatgggcttcatc
ctgggtccggtgatgggcggcctgctgggcgatatcgacctgcatctgcccttctacgtg
gccggcggcctggccctgctgaactggctctacggcttcttcgtgctgcccgagtccctg
ccggccgagcatcgccgccccttcgagtggaagagcgccaaccccgtgagcgcgctgaag
aagctctccgcgctcaagggcgtgggcagcctggtcttcgtgatcgggctctccggcctg
gctcagctgatggtgcacaccacctgggtgatctacaccggcatcaagttcggctggggc
cccaaggagaacgggctctcgctctttgccgtgggcgccatggcggtgctggtgcagggt
ttcctgctgccgcgcctgctcaagcgcttcagcccgcagcgcctggtggtctggggcctg
gcctccagcgtgatcacgaatttcgtctggggcgcggccaccgagggctggatgatgtac
gccatcatcgccttcaacatcctgggcttcgcggcctccaccgcgatgcagagcctggtg
tccaatgccgccgacgccaagacccaaggccagaccatgggtgccgtctcctcgctcaac
agcgtgatggcggtgctggcgccagtgctgggcatgggcctgatgtacctggtggccgag
ctgccgcgcggtgactggcgcatcggcgcgcccttctatttctgcgctctgctgcagacc
gcttccctcttctttgcctggcgtcatttcggtcgccaggccaacccggtgccgctggcc
cgggcttcttga
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