Shinella sp. XGS7: LHJ69_13180
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Entry
LHJ69_13180 CDS
T10581
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
shin Shinella sp. XGS7
Pathway
shin00541
Biosynthesis of various nucleotide sugars
shin01100
Metabolic pathways
shin01250
Biosynthesis of nucleotide sugars
Module
shin_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LHJ69_13180 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shin01005
]
LHJ69_13180 (kdsB)
Enzymes [BR:
shin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LHJ69_13180 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
shin01005
]
Lipid A
LHJ69_13180 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DSBA
Motif
Other DBs
NCBI-ProteinID:
UDF33575
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Position
complement(2877010..2877762)
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AA seq
250 aa
AA seq
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MSFSVIIPARLASTRLPDKPLADIHGLPMIVRVARRAALSQARQVVVATDAPEVQAACAA
HGVRALLTRADHVSGSDRLAEACEQLGLDGRELVVNVQGDEPLIAPTMIDACAALLSQRE
DCVMATVGHALDEAAEFANPNVVKLVADARGTALYFSRAPIPWWRDAPASAPGFQPGAVL
RHVGLYAYHAGFLRRFPGLAVSPLEQIESLEQLRVLWHGERIAVHVSAEKPGPGVDTPED
LARVRTLIQP
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagcgtcatcatcccggcacgcctggcctccacccgcctgcccgacaagccc
ctggccgatatccacggcctgcccatgatcgtgcgcgtggcccgccgcgccgcgctctcg
caggcgcgtcaggtggtggtggcgaccgatgcgcccgaggtgcaggccgcgtgtgccgcc
cacggcgtgcgggcgctcctgacgcgggctgatcatgtctcgggcagcgaccgcctggcc
gaggcctgcgaacagctgggcctggacggccgcgagctggtggtgaatgtgcagggcgac
gagcccctgatcgccccgaccatgatcgatgcctgcgctgccctgctgagccagcgcgag
gactgcgtgatggccaccgtgggccatgcgctggacgaggccgccgagttcgccaacccc
aatgtggtgaagctggtggcggatgcccgcggcacggcgctgtacttctcgcgcgccccc
attccctggtggcgcgacgcaccggccagcgccccgggcttccagcccggcgcggtactg
cgccatgtgggtctgtatgcctatcacgccggctttctgcgccgtttccccggcctggcg
gtgagcccgctggagcagatcgagtcgctggagcagctgcgcgtgctctggcatggcgag
cgcatcgccgtgcatgtgagcgccgagaagcccggccccggcgtggacacgcccgaggat
ctggcccgggtacgcaccctgatccaaccctga
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