Shinella sp. XGS7: LHJ69_14535
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Entry
LHJ69_14535 CDS
T10581
Name
(GenBank) diguanylate cyclase
Organism
shin Shinella sp. XGS7
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
GGDEF
Y_Y_Y
GGDEF_2
Beta-prop_LRRK2
Cas10-Cmr2_palm2
GRDA
Motif
Other DBs
NCBI-ProteinID:
UDF33830
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All DBs
Position
complement(3145910..3149140)
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AA seq
1076 aa
AA seq
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MPPCSACRPSSAPQPSTAALPHLPLRAAPAAFLARALLALWLILPLGLGAAPPAPTAPTA
PTVASSPAAAAPAPKPGYAALAGPTVALSQYKLDLWQTEQGLPLNTVQALLQTRDGQLWV
GTAGGLARFDGLRFRGFDQAQAPGMASEPIFGLMEDRQGGLWIGHSQGAARYRQGRFETV
IDAEHSGGRRIWAFAEAPDGTVWAAGENGLLRREAPATPGGGTRFTRYQEAEGLPTKRLR
SLVLDAQGWLWMGSTGGGLILRDPANGRFHVLKPGQGGFPHLQVRQVLLDPRGRGIWAAT
AGAGLVHVERLAGPAGAGPQFALQVYTTADGLPSDHLTALALDGQRRLWIASWGAGLSRL
ESLPEPGGPPPRFSPALNAEQGLAGNQIWSLQTDREGSVWVGTWVGGLNRLRNRAFTVFG
TPEGLVHDNTRAVLHARDGSRSWVATAGGGLSRIDHRAGTVTAIVRRERGGLLLSDEIST
LLEDRRDGTLWVGSYTAGLMHLSADGEQLLASYGVAEGLPNAEIRALLQDRSERLWIGTR
GGLARLDAAGPAHLPTAVQDPALPQEGIAAMLEDSRGRLWFGTTGQGLLRLDADGRFSRL
SKADGLVSDWIMALYEDAAGTLWIGSNGEGLNRLSREGRLASIRVRDGLWDALAQVILED
AQGQLWMSCNRGFYRVARAELDAFAEGRLARVQSLGFGPGDALRTTTFAGGLQGAGARDG
AGRLWLPSANGLVIVDPQRLPGSVRAPQLRVEGAWVNGQWQPAQPGQALQVPAGAVPVSL
EFGADTLLYAERLRFRYRMEGLGERWVDVGSAREASFPALPHGHYRFRVAASSDGGLHWQ
EAEPPLALQVQPQPWQTPWFLALSALALAGAVAGLVRLRTRALQARQREMERLVQLRTEE
LRLANEHLSRLSFVDALTGLANRRRFDVASQEEWRRARRAGQPLALLLADIDGFKRYNDV
LGHQEGDRCLARVAGVFAAAVGRAGDLAARYGGEEFVVLLPGADAGAARRLAEQIRRDCE
ALALPHPEGPAGPVVTLSLGLAACVPSDDMSLEQLLAQADAALYRAKQQGRNRVAD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
ttgccgccgtgctccgcctgccgtccgtcttcagctccgcagccgtccaccgccgcgctg
ccgcatctccccctccgcgccgcgcccgccgcctttctggcccgggcgctgctcgccctg
tggctaatcctgcctctgggcctgggcgctgccccgcccgcccccaccgctcccactgcc
cccaccgtcgccagcagcccggcagccgcagcacccgcgcccaaacccggctatgccgcc
ctggccggccccacggtagccctgagccagtacaagctggatctctggcagaccgagcaa
ggcctgcccctgaacaccgtgcaggccctgctgcagacccgcgacggccagctctgggtg
ggcacggccgggggcctggcccgcttcgacggcctgcgctttcgcggcttcgaccaggca
caggcgcccggcatggcctcggaacccatcttcggcctgatggaggaccgccagggcggt
ctgtggatcggccacagccagggcgcggcgcgctatcgccaaggccgcttcgagaccgtg
atcgatgccgagcacagcggcggccggcgcatctgggcctttgccgaggcaccggacggc
acggtctgggccgcgggcgagaacggcctgctgcgtcgcgaggcgccggccacgccgggc
gggggcacccgcttcacccgctaccaggaggccgaggggctccccaccaagcgcctgcgc
agcctggtgctggacgcccagggctggctctggatgggcagcaccggcggcggcctgatc
ctgcgcgacccggccaacggacgcttccatgtgctcaagcccggccagggcggcttcccc
catctgcaggtgcgccaggtgctgctggacccgcgtgggcggggcatctgggccgccacc
gcgggcgccggtctggtgcatgtggagcgcctggccgggccggccggggccgggccgcag
ttcgccctccaggtctacaccacggccgacggcctgccctccgaccatctcaccgccctg
gccctggacggccagcgccggctctggattgcaagctggggcgcgggcctgagccggctg
gaaagcctgcccgagccgggtggcccgccgccgcgcttcagcccggcgctcaacgccgag
caaggcctggccggcaaccagatctggagcctgcagaccgaccgcgagggcagcgtctgg
gtgggcacctgggtgggcggcctgaaccgcctgcgcaaccgggccttcaccgtgttcggc
acgcccgagggcctggtccatgacaacacccgcgccgtgctgcatgcccgagacggctcg
cgcagctgggtggccaccgccggcggcggactcagccgcatcgaccaccgcgccggcacc
gtcaccgccatcgtgcggcgcgagcgcggcggcctgctgctcagcgacgagatctccacc
ttgctggaagaccggcgcgacggcacgctctgggtgggcagctacaccgccggcctcatg
catctgagcgccgacggcgaacagctgctggccagctatggcgtggccgagggcctgccg
aacgccgagatccgcgccctgctgcaggaccgcagcgagcgcctgtggataggcacccgc
ggcggcctggcccggctggacgcggccggccccgcccatctgcccaccgccgtgcaggac
cccgccctgccccaggagggcatcgccgccatgctggaagacagccgcggccggctctgg
ttcggcaccaccggccagggcctgctgcgcctggacgccgacggccgcttcagccgcctc
agcaaagcggacggcctggtctcggactggatcatggcgctctacgaggacgccgccggc
acgctctggatcggcagcaatggcgagggtctgaaccgcctctcgcgcgagggccggctg
gccagcatccgcgtgcgcgacggactctgggatgccctggcccaggtcattctggaagac
gcccagggccagctctggatgagctgcaaccgcggcttctaccgcgtggcccgggccgag
ctggatgcttttgccgaaggacggctggcgcgcgtgcagtccctgggcttcggccccggc
gatgcgctgcgcaccaccacctttgccggcggcctgcagggcgcgggcgcccgcgatggc
gcgggccggctgtggctgccctcggccaatggcctggtgatcgtggacccgcagcgcctg
ccgggctcggtgcgcgcgcctcagctgcgtgtggagggcgcctgggtcaatggccagtgg
cagccggcgcagccgggtcaggccctgcaggtgccggccggcgcggtgccggtgagcctg
gagttcggcgccgacaccctgctctacgccgagcgcctgcgctttcgctaccgcatggaa
ggcctgggcgagcgctgggtggacgtgggcagcgcccgcgaggccagcttccccgccctg
ccccatgggcactaccgcttccgcgtggcggccagcagcgacggcggcctgcactggcag
gaggccgagccgcccctggccctgcaggtgcagccccagccctggcagacaccctggttc
ctggccctcagcgccctggcgctggcgggcgccgtggccggcctggtgcgcctgcgcacc
cgcgccctgcaggcccgccagcgcgagatggagcgcctggtgcagctgcgcaccgaggag
ctgcgcctggccaatgagcatctctcgcgcctgtccttcgtcgatgcgctgaccggcctg
gccaaccgccgccgtttcgatgtggcctcccaggaggaatggcgccgcgcccgtcgcgcc
ggccagcccctggccctgctgctggccgatatcgacggcttcaagcgctacaacgatgtg
ctgggccaccaggagggcgaccgctgcctggcccgggtggccggcgtgttcgccgcggcc
gtgggccgcgccggcgatctggcagcccgctatggcggcgaagagttcgtggtgctgctg
cccggcgcggatgccggcgccgcgcgccgcctggcggagcagatccgccgcgactgcgag
gccctggccctgccccaccccgagggcccggccggcccggtggtgaccctgagcctgggc
ctggccgcctgcgtgcccagcgacgacatgagcctggagcagctgctggcccaggcggac
gcagcgctctaccgcgccaagcagcagggccgcaaccgcgtggccgactga
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