Shinella sp. XGS7: LHJ69_14755
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Entry
LHJ69_14755 CDS
T10581
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shin03016
]
LHJ69_14755 (mnmC)
Enzymes [BR:
shin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LHJ69_14755 (mnmC)
Transfer RNA biogenesis [BR:
shin03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LHJ69_14755 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
Pyr_redox_2
FAD_binding_2
3HCDH_N
MurD-like_N
GIDA
AlaDh_PNT_C
Pyr_redox
HI0933_like
XdhC_C
Thi4
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
HcgC
Motif
Other DBs
NCBI-ProteinID:
UDF33869
LinkDB
All DBs
Position
complement(3193280..3195181)
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AA seq
633 aa
AA seq
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MKTAPIVPARVDFSDAEVAQAPDYGDVYHARAGAFAQARHVFLGGNQLPARWQGRTRFVI
LETGFGLGNNFLASWAAWREDPQRCERLVFISIEKHPLTREDLARAHARSPAPELAGQLL
AAWPPLTPNLHSLSFEQGQVRLLLALGDARDWLRELVAEVDAIYLDGFAPARNPEIWDPW
LLKSLGRLAAPGCTAATWSVARPVRDGLASAGFEVEKAPGFAAKGQMSVARFAPRHALQR
PPGRQALAPGAREALVIGAGLAGAACAHALAREGLAVTVLDARAESASEGSGNPGGLFHG
TLHPGDGVHARFNRAAALATQRLLAELPPLPWLQTGLLRLETKLDVAAMKATLATQGLPA
DYLQALTAEAAAACSGLPLHEPAWFYPGGGALPPRAYVQALLQAAQARLLTHCPVAALRR
GGAGWQALDGEGRLLAEAPALVLAGGQAGQALLASLMPGLPLVAQRGQISHLAAAAPLPR
LPVAGAGYALADGQGGLWCGATAQLGDPDPRLRENDQASNLAQWAELAGLAQAPEAPLAG
RVGWRLVTPDRLPLVGGVPAAEQGGRQDLLRGLARLPGLVLCTALGSRGISWAALAGQVA
AAQLCGSPLPLEAELADAIDPARFALRQQRKAN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgctcccattgttccggcccgcgtggatttctccgacgccgaggtcgcccag
gcgccggactacggcgatgtctaccatgcccgcgccggggcctttgcccaggcccgccat
gtcttcctgggcggcaaccagctgcccgcgcgctggcagggccgcacgcgcttcgtgatc
ctggaaaccggcttcggcctgggcaacaacttcctggccagctgggccgcctggcgcgag
gacccacagcgctgcgagcgcctggttttcatcagcatcgagaagcacccgctcacccgc
gaggacctggcccgcgcccatgcgcgcagccccgcgcccgagcttgccggccagttgctg
gcggcctggccgccgctcacgcccaatctgcacagcctgagcttcgagcagggccaggtt
cgcctgctgctggccctgggcgatgcacgcgactggctgcgcgagctggtggccgaggtg
gatgcgatctacctggacggtttcgccccggcgcgcaatccggagatctgggacccctgg
ctgctcaagtccctgggccgtctggccgcgccgggctgcaccgccgccacctggagcgtg
gcccgccccgtgcgcgacggtttggccagcgccggcttcgaggtggagaaggcgcctggt
tttgccgccaagggccagatgagcgtggcccgcttcgcgccccggcatgcgctgcagcgc
ccgcccgggcgccaggccctggcaccgggcgcccgcgaggccctggtgatcggtgcgggc
ctggccggcgccgcctgcgcccatgccctggcccgcgagggcctggccgtcacggtgctg
gacgcccgggcggagagcgccagcgagggctcgggcaatcccggcggcctcttccacggc
accctgcaccccggcgacggcgtgcatgcccgcttcaaccgcgccgccgccctggccacc
cagcgcctgctggccgagctgccgcccctgccctggctgcagaccggcctgctgcgcctg
gagaccaagctggatgtggcggccatgaaggccacgctggccacccagggcctgccggcg
gactatctgcaggccctgacggccgaggccgccgccgcgtgttccggcctgcccctgcac
gagcctgcctggttctaccccggcggcggcgccctgcccccgcgcgcctatgtccaggcc
ctgctgcaggccgcccaggcccgcctgctgacgcattgcccggtcgccgccctgcgccgg
ggtggcgcgggctggcaggccctggacggcgagggccggctgctggccgaggcccccgcc
ctggtgctggccggcggccaggccggccaggccctgctggcgtccctgatgccaggcctg
cccctggtagcccagcgcggccagatcagccatctggccgccgccgcgcccctgccccgc
ctgccggtggcgggcgccggctatgccctggccgatggtcagggcggcctgtggtgcggc
gccacggcccagctgggcgatcccgacccgcggctgcgcgagaacgaccaggccagcaat
ctggcccaatgggccgagctggccggcctggcacaggcccccgaggcgccgctggccggc
cgggtgggctggcgcctggtgacgccggaccgcctgcccctggtgggcggcgtgcccgcg
gccgagcaaggcggccgccaggacctgctgcggggcctggccaggctgccgggcctggtg
ctgtgcaccgccctgggctcgcgcggcatcagctgggccgccctggccggccaggtggcc
gccgcccagctctgcggcagccctttgccgctggaggccgagctggcggacgcgatagat
ccggcgcgattcgcactccgacagcagcgcaaggcaaattag
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