Shinella sp. XGS7: LHJ69_14825
Help
Entry
LHJ69_14825 CDS
T10581
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
shin Shinella sp. XGS7
Pathway
shin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LHJ69_14825 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shin01007
]
LHJ69_14825 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shin03016
]
LHJ69_14825 (trpS)
Enzymes [BR:
shin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LHJ69_14825 (trpS)
Amino acid related enzymes [BR:
shin01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LHJ69_14825 (trpS)
Transfer RNA biogenesis [BR:
shin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LHJ69_14825 (trpS)
Prokaryotic type
LHJ69_14825 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
UDF33883
LinkDB
All DBs
Position
complement(3209588..3210604)
Genome browser
AA seq
338 aa
AA seq
DB search
MTDSAHPAPLPRVLSGMRPTGALHLGHYHGALKNWLRLQDSHDCFFFVADWHALTTARPQ
DRAQLERHVYDMVIDWLAAGIDPERTTLFIQSRMPEHAELFTLLAMSTPLSWLERIPSFK
DLAEKAPESASYGMLGYPLLQAADILIYKAGAVPVGEDQAAHVEVTREVARRFNHLYGQG
QALLPEPQTLLTDTARIAGLDGRKMSKSHGNAIAMRESPESTAEKIRTMPTDPQRARRGD
PGEPQRCPVWPLHELYSDAATLDWAAQGCRAAGIGCLDCKQPLIEGVQRQQAQWRERADQ
YLANPKQVHWIVEVGAERARAVARKTLREVRAAMGLAY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacagactctgcccaccccgcccccctgccccgcgtgctctccggcatgcgccccacc
ggcgccctgcacctgggccactaccacggcgcgctgaagaactggctgcgcctgcaggac
agccacgactgcttcttcttcgtggccgactggcacgcgctcaccaccgcccgcccccag
gaccgagcccagctggagcgccatgtctacgatatggtgatcgactggctggccgccggc
atcgaccccgagcgcaccaccctcttcatccagagccgcatgccggagcatgccgagctc
ttcaccctgctggccatgagcacgcccctgtcctggctggagcgcattcccagcttcaag
gacctggccgagaaagcgcccgagagcgccagctacgggatgctgggctacccgctgctg
caggccgccgacatcctgatctacaaggccggcgccgtgcccgtgggcgaagaccaggcc
gcccatgtggaggtcacgcgcgaggtggcccgccgcttcaaccacctctacggccagggt
caggccttgctgcccgaaccccagaccctgctcaccgacaccgcgcgcatcgccggcctg
gacggccgcaagatgagcaagagccacggcaatgccatcgccatgcgcgagtcgcccgag
agcacggccgagaagatccgcaccatgcccaccgacccgcagcgcgcccgccgcggtgac
cccggcgagccccagcgctgcccggtctggcccctgcacgagctctacagcgacgcggcc
accctggactgggccgcccagggctgccgcgccgccggcatcggctgcctggactgcaag
cagcccctgatcgagggcgtgcagcgccagcaggcccagtggcgcgaacgcgccgaccag
tacctggccaaccccaagcaggtgcactggatcgtggaggtgggcgccgagcgcgcccgc
gccgtggcgcgcaagaccctgcgcgaggtgcgcgccgccatgggcctggcctactga
DBGET
integrated database retrieval system
