Shinella sp. XGS7: LHJ69_15650
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Entry
LHJ69_15650 CDS
T10581
Name
(GenBank) hypothetical protein
Organism
shin Shinella sp. XGS7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALTTAQ_rpt
Phage_TAC_7
TPR_AP5Z1
Motif
Other DBs
NCBI-ProteinID:
UDF34033
LinkDB
All DBs
Position
complement(3411556..3421119)
Genome browser
AA seq
3187 aa
AA seq
DB search
MASLITGFNTTQIAGLTSTTLARLTTEDWAAFNSDQIAALTTYQVASLGTKAIAALNTTQ
ISWFKTDDVAAFNTTAIRALSTAQVAALNSDQIGSLTTNQVKSFTTTQIAGMNSDDLNAL
TTDQLPALTSTQVGAIGTTQLTKITTDDLAALSSTSIRGFTSDQIKALTTDQIVALTTDQ
ARALTTTQIAGLTTTQIGKLETDDLVALNSAALRGLNTTQLAALNSDQIGALLTSQVASL
TTAQINGLNSDDLNALTTDQVKALTSAQAAAIGTTQLAKMTTDDIEALSTNAVRALNSDQ
VKALTTDQVVALSTDQAKALTTTQVAGLTTTQIANMQSDDVAALNTAALRGLNTTQLAAL
NSDQIAALTTAQVTSLTTAQINGLNSDDLNALTTAQVRALTSAQAGAIGTTQLAKMTTDD
VEALSTAAVRALSSDQVKALTTDQVVALSTDQARALTTTQVAGLTTTQIANMQSDDLAAL
NTAALRGLNTTQLAALNSDQIAALTTAQVASLSTTQINGLNSDDLNALTTDQFKALSSTQ
VAAIGTTQLAKVTTDDIAALSTSAVRALTTDQTKAMTSDQIGALQTNQVAALTTAQINGL
NSDSLNALNTDQVKALTSAQVAAIGTTQLSKMTTDDIEAISTAGVRALNSDQVKALTTDQ
VVALSTDQARALTTTQVAGLTTTQIANMQSDDVAALNTAALRGLNTTQLAALNSDQIAAL
STAQVASLTTTQINGLNSDDLNALSSDQVKALSSTQVAAIGTTQLAKMTTDDVGAISTAA
VRALSSDQVKAMTTDQIVALTTDQARALTSTQMAGLTTTQLNKMESDDLRALSTAAIRAL
NTDQLKNLTTDQLAAMTTAQIAAMATVPTNQLGGLTTDAIKALTTDQARALTSAQVGGFS
TTQVAAFDTDDLAALNTAALRALNTTQLAALNSDQIGALLTSQVASLTTAQINGLNSDDL
NALTTDQVKALTSAQAAAIGTTQLAKMTTDDIEALSTNAVRALNSDQVKALTTDQVVALS
TDQAKALTTTQVAGLTTTQIANMQSDDVAALNTAALRGLNTTQLAALNSDQIAALTTAQV
TSLTTAQINGLNSDDLNALTTAQVRALTSAQAGAIGTTQLAKMTTDDVEALSTAAVRALS
SDQVKALTTDQVVALSTDQARALTTTQVAGLTTTQIANMQSDDLAALNTAALRGLNTTQL
AALNSDQIAALTTAQVASLSTTQINGLNSDDLNALTTDQFKALSSTQVAAIGTTQLAKVT
TDDIAALSTSAVRALTTDQTKAMTSDQIGALQTNQVAALTTAQINGLNSDSLNALNTDQV
KALTSAQVAAIGTTQLSKMTTDDIEAISTAGVRALNSDQVKALTTDQVVALSTDQARALT
TTQVAGLTTTQIANMQSDDVAALNTAALRGLNTTQLAALNSDQIAALSTAQVASLTTTQI
NGLNSDDLNALSSDQVKALSSTQVAAIGTTQLAKMTTDDVGAISTAAVRALSSDQVKAMT
TDQIVALTTDQARALTSTQMAGLTTTQLNKMESDDLRALSTAAIRALNTDQLKNLTTDQL
AAMTTAQIAAMATVPTNQLGGLTTDAIKALTTDQARALTSAQVGGFSTTQVAAFDTDDLA
ALNTAALRALNTTQLAALNSDQIGALLTSQVASLTTAQINGLNSDDLNALTTDQVKALTS
AQAAAIGTTQLAKMTTDDIEALSTNAVRALNSDQVKALTTDQVVALSTDQAKALTTTQVA
GLTTTQIANMQSDDVAALNTAALRGLNTTQLAALNSDQIAALTTAQVTSLTTAQINGLNS
DDLNALTTAQVRALTSAQAGAIGTTQLAKMTTDDVEALSTAAVRALSSDQVKALTTDQVV
ALSTDQARALTTTQVAGLTTTQIANMQSDDLAALNTAALRGLNTTQLAALNSDQIAALTT
AQVASLSTTQINGLNSDDLNALTTDQFKALSSTQVAAIGTTQLAKVTTDDIAALSTSAVR
ALTTDQTKAMTSDQIGALQTNQVAALTTAQINGLNSDSLNALNTDQVKALTSAQVAAIGT
TQLSKMTTDDIEAISTAGVRALNSDQVKALTTDQVVALSTDQARALTTTQVAGLTTTQIA
NMQSDDVAALNTAALRGLNTTQLAALNSDQIAALSTAQVASLTTTQINGLNSDDLNALSS
DQVKALSSTQVAAIGTTQLAKMTTDDVGAISTAAVRALSSDQVKAMTTDQIVALTTDQAK
ALTTTQVAGLTTTQIANLQSDDLAALNTAALRGLNTTQLAALNSDQIAALTTAQVASLST
TQINGLNSDDLNALTTDQFKALSSAQAAAIGTTQLAKMTTDDVGALSTAAVRALSTDQLK
AMTSDQMGSLSTAQVASLTTAQINGLTSDGLNALNTDQIRALTSAQAAAIGTTQLAKMTT
DDIEALSTAAVRAFNSDQVKALTTDQIVALSTDQARALTTTQVAGLTTTQIANMQSDDLA
ALNSGALRGFNTTQLAALNSDQIGALLTSQVAALTTTQINGLNSDDLNALNTDQIKALTS
AQVASIGTTQLAKMTTDDIEALSTNAVRALTTDQIKALTTDQLVAMTTDQFRALSSGQMA
GLTTTQLTKLESDDLRALSTAAINALTTTQFAGLTSDQVQQLAPSQMPGVNSAQIAGMGS
DDFKAWTTDQFAALTSVQIAGVTTQQFAAIETDDLRALNAFAFRSINTAQLAALNSDQIQ
SLTNVQVQAMTTTQVAGLQSDDLLALTTSQVSLLNSMQLGALSTTQVSQLETNDVAAISA
GAFRGLGSDDLKAFTSDQVAAFTTTQLSAMTTAQVVGLDASDVDNISTDALLGLSTAALR
AMTTTQIQAFTTDQTHVLTTAQIAAFNTDQIKALQTDDMQAFTSTQIAAFTSTQIAALST
TQLRQFDSDDLSALTTAQIAGLTTDHIRSITTDQLPGLETADIAKMNMAQAYAFTSDQVN
AMTTDQSNALWLATPIVLDLDGNGINTLSAAQGVNFDLRGNGQVQRWGWVGGNDGLLVMD
RNGDGIINDGRELFGAGTVLANGKQGADGFTAMRQEDTNHDGKLDANDLHFKDLRVWVDA
NHDGKTDAGELKTLADLGIVEMNLGAKAGSEVDNGNLLGLVSDYKKSDGSTHALTDVWFA
REGGGGGNTPPVSLGDVLAAPTTPVLHEGAPAGGAPAGTPSNGLQVSHLLIAKRPEDDDQ
QSATPLI
NT seq
9564 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctgatcaccggtttcaatacgacccagattgctggcctcacgagcaccacg
ctggcacgcctgaccactgaggactgggccgctttcaactcggatcagatcgctgcgctg
accacctaccaggtggcctcgctgggcaccaaggccatcgcggcgctgaacaccacccag
atcagctggttcaagaccgacgatgtcgcggccttcaacaccacggccatccgggccctg
agcacggcccaggttgcggccctgaactccgaccagatcggctccctgaccaccaatcag
gtcaagtccttcacgaccacccagatcgccggcatgaacagcgacgatctgaacgccctg
accacggatcagctgcccgccctcacctccacccaggtgggcgccatcggcacgacccag
ctgaccaagatcaccaccgacgatctggcggccctgtcttccaccagcatccgcggcttc
accagcgaccagatcaaggccctgaccacggaccagatcgtggccctgaccacggatcag
gcgcgcgccctgaccaccacccagatcgccggcctcaccaccacccagatcggcaagctg
gaaaccgatgatctggtggccctgaacagcgccgccctgcgcggcctcaacaccacgcag
ctggccgcgctgaactccgaccagatcggcgccctgctgaccagccaggtggcttcgctg
accacggcccagatcaacggcctcaacagcgacgacctcaacgccctgaccaccgaccag
gtcaaggccctgacctccgcgcaggccgcggccatcggcaccacccagctggccaagatg
accacggacgacatcgaggccctctcgaccaacgccgtgcgggccctgaactccgaccag
gtcaaggcgctcaccaccgaccaggtcgtggccctcagtaccgaccaggccaaggccctg
accaccacgcaagtggccggtctgaccaccacgcagatcgccaatatgcagagcgatgat
gtggcggccctgaacaccgccgccctgcgtggcctgaacaccacccagctggcggccctg
aactccgaccagatcgcggccctcacgaccgcccaggtcacctcgctgaccacggcccag
atcaacggcctcaacagcgacgacctcaacgccctgaccacggcccaggtccgtgccctg
acctcggcccaggccggcgccatcggcaccacccagctggccaagatgaccacggacgat
gtggaggccctgtccaccgccgccgtgcgggcgctgagctccgaccaggtcaaggcgctg
accaccgaccaggtcgtggccctgtccaccgaccaggcccgggccctgaccaccacgcaa
gtggcgggtctcacgaccacccagatcgccaatatgcagagcgacgatctggcagcgctc
aacaccgccgccctgcgcggtctgaacaccacccagctggcggccctgaactccgaccag
atcgcggcgctcacgaccgcccaggtcgcctcgctgagcaccacccagatcaatggcctc
aacagcgatgatctgaacgccctgaccaccgaccagttcaaggccctgagctccacccag
gtggccgccatcggcaccacccagctggccaaggtcaccaccgacgacatcgccgccctg
tccacgtctgccgtgcgcgccctgaccacggaccagaccaaggccatgacctccgaccag
atcggagccctgcagaccaaccaggtcgccgccctgaccacggcccagatcaatggcctg
aacagcgacagcctcaacgccctgaacaccgaccaggtcaaggccctgacctccgcccag
gtggccgccatcggcaccacccagctgtccaagatgaccacggacgacatcgaggccatc
tccacggccggcgtgcgtgcgctcaactccgaccaggtcaaggcgctcaccaccgaccag
gtcgtggccctcagcaccgaccaggcccgtgccctgaccaccacgcaagtggccggtctg
accaccacccagatcgccaatatgcagagcgatgatgtggcggccctgaacaccgctgcc
ctgcgtggcctgaacaccacccagctggcggccctgaactccgaccagatcgcggccctg
tccaccgcccaggtcgcctcgctgaccaccacccagatcaacggcctgaacagcgatgac
ctcaacgccctgagctccgaccaggtcaaggccctgagctccacccaggtggccgccatc
ggcaccacccagctggccaagatgaccacggacgacgtgggcgccatctccaccgccgcc
gtgcgtgccctgagctccgaccaggtcaaggccatgaccaccgaccagatcgtggccctc
accaccgatcaggcccgtgccctgacctccacccagatggccgggctgaccaccacccag
ctcaacaagatggagagcgacgacctgcgcgccctctccaccgcggccatccgcgcgctg
aacaccgaccagctcaagaacctcaccaccgaccagctcgccgccatgaccaccgcgcag
atcgcggccatggcgaccgtgcccaccaaccagctcggcggcctgaccaccgacgccatc
aaggccctcaccaccgatcaggcccgtgccctgacctccgcccaggtcggtggcttcagc
accacccaggtcgcggccttcgacaccgacgacctcgcggccctgaacaccgccgctctg
cgtgcgctcaacaccacgcagctggccgcgctgaactccgaccagatcggcgccctgctg
accagccaggtggcttcgctgaccacggcccagatcaacggcctcaacagcgacgacctc
aacgccctgaccaccgaccaggtcaaggccctgacctccgcgcaggccgcggccatcggc
accacccagctggccaagatgaccacggacgacatcgaggccctctcgaccaacgccgtg
cgggccctgaactccgaccaggtcaaggcgctcaccaccgaccaggtcgtggccctcagt
accgaccaggccaaggccctgaccaccacgcaagtggccggtctgaccaccacgcagatc
gccaatatgcagagcgatgatgtggcggccctgaacaccgccgccctgcgtggcctgaac
accacccagctggcggccctgaactccgaccagatcgcggccctcacgaccgcccaggtc
acctcgctgaccacggcccagatcaacggcctcaacagcgacgacctcaacgccctgacc
acggcccaggtccgtgccctgacctcggcccaggccggcgccatcggcaccacccagctg
gccaagatgaccacggacgatgtggaggccctgtccaccgccgccgtgcgggcgctgagc
tccgaccaggtcaaggcgctgaccaccgaccaggtcgtggccctgtccaccgaccaggcc
cgggccctgaccaccacgcaagtggcgggtctcacgaccacccagatcgccaatatgcag
agcgacgatctggcagcgctcaacaccgccgccctgcgcggtctgaacaccacccagctg
gcggccctgaactccgaccagatcgcggcgctcacgaccgcccaggtcgcctcgctgagc
accacccagatcaatggcctcaacagcgatgatctgaacgccctgaccaccgaccagttc
aaggccctgagctccacccaggtggccgccatcggcaccacccagctggccaaggtcacc
accgacgacatcgccgccctgtccacgtctgccgtgcgcgccctgaccacggaccagacc
aaggccatgacctccgaccagatcggagccctgcagaccaaccaggtcgccgccctgacc
acggcccagatcaatggcctgaacagcgacagcctcaacgccctgaacaccgaccaggtc
aaggccctgacctccgcccaggtggccgccatcggcaccacccagctgtccaagatgacc
acggacgacatcgaggccatctccacggccggcgtgcgtgcgctcaactccgaccaggtc
aaggcgctcaccaccgaccaggtcgtggccctcagcaccgaccaggcccgtgccctgacc
accacgcaagtggccggtctgaccaccacccagatcgccaatatgcagagcgatgatgtg
gcggccctgaacaccgctgccctgcgtggcctgaacaccacccagctggcggccctgaac
tccgaccagatcgcggccctgtccaccgcccaggtcgcctcgctgaccaccacccagatc
aacggcctgaacagcgatgacctcaacgccctgagctccgaccaggtcaaggccctgagc
tccacccaggtggccgccatcggcaccacccagctggccaagatgaccacggacgacgtg
ggcgccatctccaccgccgccgtgcgtgccctgagctccgaccaggtcaaggccatgacc
accgaccagatcgtggccctcaccaccgatcaggcccgtgccctgacctccacccagatg
gccgggctgaccaccacccagctcaacaagatggagagcgacgacctgcgcgccctctcc
accgcggccatccgcgcgctgaacaccgaccagctcaagaacctcaccaccgaccagctc
gccgccatgaccaccgcgcagatcgcggccatggcgaccgtgcccaccaaccagctcggc
ggcctgaccaccgacgccatcaaggccctcaccaccgatcaggcccgtgccctgacctcc
gcccaggtcggtggcttcagcaccacccaggtcgcggccttcgacaccgacgacctcgcg
gccctgaacaccgccgctctgcgtgcgctcaacaccacgcagctggccgcgctgaactcc
gaccagatcggcgccctgctgaccagccaggtggcttcgctgaccacggcccagatcaac
ggcctcaacagcgacgacctcaacgccctgaccaccgaccaggtcaaggccctgacctcc
gcgcaggccgcggccatcggcaccacccagctggccaagatgaccacggacgacatcgag
gccctctcgaccaacgccgtgcgggccctgaactccgaccaggtcaaggcgctcaccacc
gaccaggtcgtggccctcagtaccgaccaggccaaggccctgaccaccacgcaagtggcc
ggtctgaccaccacgcagatcgccaatatgcagagcgatgatgtggcggccctgaacacc
gccgccctgcgtggcctgaacaccacccagctggcggccctgaactccgaccagatcgcg
gccctcacgaccgcccaggtcacctcgctgaccacggcccagatcaacggcctcaacagc
gacgacctcaacgccctgaccacggcccaggtccgtgccctgacctcggcccaggccggc
gccatcggcaccacccagctggccaagatgaccacggacgatgtggaggccctgtccacc
gccgccgtgcgggcgctgagctccgaccaggtcaaggcgctgaccaccgaccaggtcgtg
gccctgtccaccgaccaggcccgggccctgaccaccacgcaagtggcgggtctcacgacc
acccagatcgccaatatgcagagcgacgatctggcagcgctcaacaccgccgccctgcgc
ggtctgaacaccacccagctcgcggccctgaactccgaccagatcgcggcgctcacgacc
gcccaggtcgcctcgctgagcaccacccagatcaatggtctgaacagcgatgacctcaac
gccctgaccaccgaccagttcaaggccctgagctccacccaggtggccgccatcggcacc
acccagctggccaaggtcaccaccgacgacatcgccgccctgtccacgtctgccgtgcgc
gccctgaccacggaccagaccaaggccatgacctccgaccagatcggagccctgcagacc
aaccaggtcgccgccctgaccacggcccagatcaatggcctgaacagcgacagcctcaac
gccctgaacaccgaccaggtcaaggccctgacctccgcccaggtggccgccatcggcacc
acccagctgtccaagatgaccacggacgacatcgaggccatctccacggccggcgtgcgt
gcgctcaactccgaccaggtcaaggcgctcaccaccgaccaggtcgtggccctcagcacc
gaccaggcccgtgccctgaccaccacgcaagtggccggtctgaccaccacccagatcgcc
aatatgcagagcgatgatgtggcggccctgaacaccgctgccctgcgtggcctgaacacc
acccagctggcggccctgaactccgaccagatcgcggccctgtccaccgcccaggtcgcc
tcgctgaccaccacccagatcaacggcctgaacagcgatgacctcaacgccctgagctcc
gaccaggtcaaggccctgagctccacccaggtggccgccatcggcaccacccagctggcc
aagatgaccacggacgacgtgggcgccatctccaccgccgccgtgcgtgccctgagctcc
gaccaggtcaaggccatgaccaccgaccagatcgtggccctcaccaccgatcaggccaag
gccctgaccacgacccaggtggccggtctcacgaccacccagatcgcgaacctgcagagc
gatgatctggcggcgctcaacaccgcggccctgcggggtctgaacaccacccagctggcg
gccctgaactccgaccagatcgcggccctcacgaccgcccaggtcgcctcgctgagcacc
acccagatcaatggtctgaacagcgatgacctcaacgccctgaccaccgaccagttcaag
gctctgagctcggcccaggccgcagccatcgggaccacccagctggccaagatgaccacc
gacgatgtgggcgccctgtccacggcggcggtgcgggcgctgagcaccgaccagctcaag
gccatgacctcggatcagatgggttcgctgtccacggcccaggtggcctcgctgaccacg
gcccagatcaatggcctgaccagcgatggtctgaatgccctgaacaccgaccagatccgt
gccctgacctcggcccaggccgcggccatcggcaccacccagctggccaagatgaccacg
gacgatatcgaggccttgtccacggccgcggtgcgggccttcaactccgaccaggtcaag
gccctgaccacagaccagatcgtggccctcagcaccgaccaggcccgtgccctgaccacc
acgcaagtggccggtctgaccaccacccagatcgccaatatgcagagcgacgatctggcg
gcgctcaactccggggcactgcgcggtttcaacaccacccagctggctgcgctgaactcc
gaccagatcggcgccctgctcaccagccaggtggcggcgctgacgaccacgcagatcaac
ggtctgaacagcgatgatctgaacgcactgaacaccgatcagatcaaggcgctgacctcg
gcccaggtggcgtccatcggcaccacccagctggccaagatgaccacggacgatatcgag
gccctctcgaccaatgccgtgcgcgccctgacgaccgatcagatcaaggccctgaccacc
gatcagctggtggccatgacgacggaccagttccgcgccctgagctccggccagatggcg
ggtctgacgaccacccagctgaccaagctggagagcgacgatctgcgcgccctgagcacg
gcggccatcaatgcgctgacgaccacccagttcgcgggcctgacctcggatcaggtgcag
cagctggcgccttcgcagatgcccggtgtgaactcggcccagattgccggcatgggttcg
gacgacttcaaggcctggaccacggaccagttcgcggccctgacctcggtgcagatcgcc
ggcgtgaccacccagcagttcgcagccatcgagacggatgatctgcgcgcgctgaacgcc
ttcgccttccgctcgatcaacaccgcccagctggcggccctgaactcggatcagatccag
tcgctgaccaatgttcaggtccaggccatgacgaccacgcaggtcgccggtctgcagagc
gacgatctgctggccctgaccaccagccaggtctcgctgctgaactcgatgcagctcggc
gcgctgagcaccacccaggtcagccagctggaaacgaacgatgtggcggcgatctcggcc
ggcgccttccgcggcctgggcagcgacgacctcaaggccttcaccagcgatcaggtggct
gccttcaccacgacccagctgagcgccatgaccaccgcccaggtggtgggcttggacgcc
tcggacgttgacaacatcagcaccgatgccctgctgggcctgagcaccgccgccctgcgt
gcgatgaccacgacccagatccaggccttcaccacggatcagacccatgtgctgacgacc
gcccagatcgcggccttcaacacggatcagatcaaggcgctgcagaccgacgatatgcag
gccttcacctcgacccagatcgcggccttcacgtccacccagattgcagcgctgagcacc
acccagctgcggcagttcgactcggacgacttgagtgccctgaccacggcccagatcgcc
ggcctgaccaccgaccatatccgcagcatcaccacggatcagctgccgggtctggagacg
gccgatatcgcgaagatgaacatggcccaggcctatgccttcaccagcgatcaggtcaac
gcgatgacgaccgaccagtccaacgccctgtggctggccacacccatcgtgctggatctg
gatggcaacggcatcaacaccttgtccgcggcccagggcgtgaacttcgacctgcgcggc
aacggccaggtgcagcgctggggctgggtgggtggcaatgacggtctgctggtgatggat
cgcaacggcgacggcatcatcaacgacggtcgcgaactcttcggtgccggtaccgtgctg
gccaatggcaagcaaggggccgacggcttcaccgccatgcgccaggaggacaccaaccac
gacggcaagctggacgccaatgatctgcacttcaaggatctgcgtgtctgggtggatgcc
aaccacgacggcaagaccgacgcgggtgagctcaagaccctggccgatctgggcatcgtc
gagatgaacctcggcgccaaggcgggcagcgaggtggacaacggcaatctgctgggcctg
gtgtcggactacaagaagtccgatggcagcacccacgcactcaccgacgtctggtttgcc
cgcgagggtggcggtggcggcaacacgcccccggtcagcctgggcgatgtgctggcggcg
cctaccaccccggtgctgcacgagggagccccggccggcggtgccccggcgggcacgccc
agcaatggcctgcaggtgagccatctgctgatcgccaagcgaccggaggacgacgaccag
cagtcggccacgccgctgatctaa
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integrated database retrieval system