Shinella sp. XGS7: LHJ69_15690
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Entry
LHJ69_15690 CDS
T10581
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
shin Shinella sp. XGS7
Pathway
shin00280
Valine, leucine and isoleucine degradation
shin00630
Glyoxylate and dicarboxylate metabolism
shin00640
Propanoate metabolism
shin00720
Other carbon fixation pathways
shin01100
Metabolic pathways
shin01120
Microbial metabolism in diverse environments
shin01200
Carbon metabolism
shin04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LHJ69_15690 (scpA)
00640 Propanoate metabolism
LHJ69_15690 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
LHJ69_15690 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LHJ69_15690 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
LHJ69_15690 (scpA)
Enzymes [BR:
shin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
LHJ69_15690 (scpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UDF34041
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Position
3428077..3430254
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AA seq
725 aa
AA seq
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MSESHKPSPSSEFAAATLEQWHKAAAKSAPGGDVAALNWVTPEGLIVKPLYTAADTADLP
HADTLPGFAPFVRGPRATMYAGRPWTIRQYAGFSTAEASNAFYRKALAAGQQGVSVAFDL
ATHRGYDSDHPRVVGDVGKAGVAIDSVEDMKILFSSIPLEKISVSMTMNGAVIPILASFI
VAGEEQGVPRAALSGTIQNDILKEFMVRNTYIYPPEPSMRIVADIIDYTARDMPKFNSIS
ISGYHMQEAGATLVQELAFTIADGREYVRAAIAKGLNVDDFAGRLSFFFAIGMNFFMEAA
KLRAARLLWDRVMDEFQPKKASSRMLRTHCQTSGVSLQEQDPYNNIVRTAFEAMSAVLGG
TQSLHTNSFDEAIALPTEFSARIARNTQLILQHETGVTKVVDPLAGSYYVESLTHELAEK
AWALIEEVEAMGGMTKAVDSGWAKLKIEASAAEKQARIDSGKDVIVGVNKYKLAKEDPID
ILDVDNVKVRESQIERLKSIKAKRDNAAVQAALQALTAAAQSGQGNLLDLSIQAVRLRAT
VGEISDALEAVYGRHRADTQKVTGVYAAAYDSAEGWAKLQGEIQAFAEEQGRRPRVMIAK
LGQDGHDRGAKVVATAYADLGFDVDMGPLFQTPEECARQAIENDVHAVGVSTLAAGHKTL
VPAIIAELRKQGADDIIVFVGGVIPQQDYDFLFDAGVKGIYGPGTPIPASAKDVLEQIRK
AAVAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcgcacaagcccagcccttcgtccgaatttgccgccgccaccctggagcag
tggcacaaggccgccgccaagtcggcgcccggaggggatgtcgcggccctgaactgggtg
acgccggaaggcctgatcgtcaagccgctctacaccgcggccgacaccgccgatctgccc
catgcggacaccctgccgggcttcgcacccttcgtgcgcggcccgcgcgccaccatgtat
gccggccgcccgtggacgatccggcaatatgccggtttctcgacggccgaggcttccaat
gccttctaccgcaaggcgctcgccgccggccagcagggcgtgtccgtcgccttcgacctt
gccacccatcgcggctatgacagcgaccatccgcgtgtcgtcggcgatgtcggcaaggct
ggcgtcgccatcgacagcgtcgaggacatgaagatcctgttttccagcattccgctggaa
aagatctccgtctccatgaccatgaacggcgccgtcatcccgatcctcgccagcttcatc
gtcgccggcgaggaacagggcgtgccgcgcgcggccctatcggggaccatccagaacgac
atcctcaaggagttcatggtccgcaacacctatatctacccgcccgaaccctcgatgcgc
atcgtcgccgacatcatcgactacacggcgcgggacatgccgaagttcaactccatctcg
atctccggctaccatatgcaggaggcgggcgcgacgctggtgcaggagttggccttcacc
atcgccgacgggcgcgaatatgtccgcgccgcgatcgccaaggggctgaatgtcgacgac
ttcgccggccgtctctccttcttcttcgccatcggcatgaacttcttcatggaggcggcc
aagctgcgcgccgcacgcctgctctgggaccgcgtcatggacgagttccagccgaagaag
gcgtcctcgcgcatgctgcgcacgcattgccagacatcgggcgtctcccttcaggaacag
gacccctacaacaatatcgtgcgcaccgccttcgaggccatgtccgccgtgctcggcggc
acgcagtcgctgcacaccaactccttcgacgaggccatcgcgctgccgacggagttttcc
gcccgcatcgcccgcaacacccagctcatcctccagcacgagacgggcgtgaccaaggtg
gtcgatccactcgccggctcctactatgtcgaaagcctgacccatgagctggccgaaaag
gcctgggcgctcatcgaagaggtcgaggccatgggcggcatgaccaaggccgtggacagc
ggctgggccaagctcaagatcgaggccagcgcggccgagaaacaggcgcgcatcgattcg
ggcaaggacgtgatcgtgggcgtcaacaagtacaagctcgccaaggaagaccccatcgac
attctggacgtggacaacgtcaaggtgcgcgagagccagatcgagcggctcaagagcatc
aaggccaaacgcgacaacgctgcggtgcaggccgcgctgcaggcgctgacggccgcggcc
cagagcggccagggcaatctgctcgacctgagcatccaggccgtgcgcctgcgcgccacg
gtgggcgagatttccgacgcgctggaagccgtctatggccgccatcgtgccgacacgcaa
aaggtcaccggcgtgtacgccgcggcctacgactccgccgagggctgggccaagctgcag
ggcgagatccaggcctttgccgaggaacagggccgccgtccgcgggtgatgatcgccaag
ctgggacaggatgggcacgaccgcggcgccaaggtggtggccaccgcctatgccgatctg
ggcttcgatgtggacatggggccgctgttccagacccccgaggaatgtgcccgccaggcc
atcgagaacgatgtgcacgcggtgggggtctcgacgctcgcagccggccacaagaccctg
gtgccggccatcattgccgagctccgcaagcagggggcggacgacatcatcgtcttcgtg
ggcggcgtgatcccgcagcaggactacgacttcctgtttgatgccggcgtcaagggcatc
tacggccccggcacccccatcccggccagcgccaaggatgtgctggagcagatccgcaag
gcggcggtggcggcctga
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