Shinella sp. XGS7: LHJ69_15765
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Entry
LHJ69_15765 CDS
T10581
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shin03016
]
LHJ69_15765 (truA)
Enzymes [BR:
shin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LHJ69_15765 (truA)
Transfer RNA biogenesis [BR:
shin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LHJ69_15765 (truA)
Prokaryotic type
LHJ69_15765 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UDF34055
LinkDB
All DBs
Position
3448865..3449653
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AA seq
262 aa
AA seq
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MSTRVALGVSYRGQAYKGWQSQPGGGTVQDALEKALGQFAAQPIRTICAGRTDTGVHGLN
QVVHFDAPVQREPFSWVRGTNRYLPPDIAIQWCAFPGVQFHARNHARGRRYAYLLLESAV
RPAIETGSVGWIFRPLDGEAMRAAVPHLLGEHDFSSFRSSECQAASPVKQLRRIEITKRG
AYWRFEFDASAFLHHMVRNLMGCLIAVGTGSRHPDWLIEVLAARNRDAAAPTFAPDGLYF
VGPYYDAELNLPERTAAMDWLP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacaagggtggcgctgggcgtcagctatcgcggacaggcctacaagggctggcag
agccagcccggcggcggcacggtgcaggacgcgctggaaaaggccctgggccagttcgcc
gcccagcccatccgcacgatctgcgccggccgcaccgacaccggcgtgcatggcctgaac
caggtggtgcatttcgatgcgccggtgcagcgcgagcccttttcctgggtgcgcggcacc
aaccgttatctgccgcccgatatcgccatccagtggtgtgccttcccgggggtgcagttc
catgcgcgcaaccacgcgcgcggccggcgctacgcctatctgctcctggagtcggccgtg
cggcccgccatcgagaccggctcggtgggctggatcttccggccgctggacggtgaggcc
atgcgcgccgccgtgccgcatctgctgggcgagcatgatttctcgtccttccgctcctcc
gaatgccaggccgcttcgccggtgaagcagctgcggcgcatcgagatcaccaagcggggc
gcctactggcgcttcgagttcgacgcctcggcctttttgcaccatatggtgcgcaatctg
atgggctgtctgattgccgtgggcacgggcagccggcatcccgactggctgatcgaggtg
ctggcggcgcgcaaccgcgacgcggcggcgcccacctttgcccccgatggcctctatttc
gtcggtccttattacgatgccgagctgaacctccccgaacgcacggcggccatggactgg
ctgccctga
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