Shinella sp. XGS7: LHJ69_16590
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Entry
LHJ69_16590 CDS
T10581
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shin Shinella sp. XGS7
Pathway
shin00260
Glycine, serine and threonine metabolism
shin00460
Cyanoamino acid metabolism
shin00630
Glyoxylate and dicarboxylate metabolism
shin00670
One carbon pool by folate
shin00680
Methane metabolism
shin01100
Metabolic pathways
shin01110
Biosynthesis of secondary metabolites
shin01120
Microbial metabolism in diverse environments
shin01200
Carbon metabolism
shin01230
Biosynthesis of amino acids
shin01240
Biosynthesis of cofactors
shin04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LHJ69_16590
09102 Energy metabolism
00680 Methane metabolism
LHJ69_16590
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LHJ69_16590
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LHJ69_16590
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LHJ69_16590
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LHJ69_16590
Enzymes [BR:
shin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LHJ69_16590
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UDF34197
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Position
3619840..3621093
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AA seq
417 aa
AA seq
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MFDRSQSTLANVDPELWAAVQNENRRQEGEIELIASENIVSRAVLEAQGSIMTNKYAEGY
PGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGDTFMGL
DLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDHLLDMDDVAEKARKNKPKLIIAGGTAYS
RIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGV
VLTNDEDIAKKINSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKEYAAQIVKNAKALAE
TLKAGGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPIVTS
GIRLGTPAGTTRGFKEEEFRQIGHLIGDVLDKPHDEANLAAVREKVAALTRDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcgcagccaatcgaccctcgccaacgtcgaccccgaactgtgggccgccgtc
cagaacgaaaaccgtcgccaggagggcgagatcgagctgatcgcttcggaaaacatcgtt
tcccgcgccgtgctcgaagcgcagggctcgatcatgacgaacaagtatgccgagggctat
ccgggcaagcgctactatggcggctgccagttcgtcgacatcgcggaagaactcgccatc
gagcgcgccaagaagctgttcggcgtcaacttcgccaacgtgcagccgaattccggctcg
cagatgaaccaggccgtcttcctcgcactgctgcagccgggcgacaccttcatgggcctc
gacctcaattcgggcggccacctgacgcacggctcgccggtcaacatgtccggcaagtgg
ttcaacgtcgtttcctacggcgtgcgtgaaggcgaccacctgctcgacatggacgatgtc
gccgagaaggcccgcaagaacaagccgaagctcatcatcgccggcggcaccgcctattcc
cgcatctgggactggaagcgcttccgcgagatcgccgatgaagtcggcgcctatctcatg
gtcgacatggcccacatcgccggcctcgtcgccggtggccagcatccgtcgccgttcccg
cattgccacgttgccaccaccaccacgcacaagtcgctgcgcggcccgcgcggcggcgtc
gtgctgacgaacgacgaggacatcgccaagaagatcaactcggccgtcttcccgggcctc
cagggcggcccgctgatgcacatcatcgccgccaaggccgtcgccttcggcgaggcgctg
cagccggaattcaaggaatacgccgcgcagatcgtcaagaacgccaaggcgctcgccgag
acgctgaaggccggcggcctcgacatcgtttcgggcggcaccgacaaccacctgatgctg
gtggatctgcgcaagaagaacgcgaccggcaagcgcgccgaagccgcgctcggccgcgcc
tatgtcacctgcaacaagaacggcattccgttcgacccggaaaagcccatcgtcacctcc
ggcatccgcctcggcacgccggccggcacgacgcgcggcttcaaggaagaagagttccgg
cagatcggccacctgatcggcgacgtgctggacaagccgcatgacgaggccaatctggcc
gccgtgcgcgagaaggtcgccgccctgacgcgcgacttcccggtctaccgctga
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