Shinella sp. XGS7: LHJ69_16640
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Entry
LHJ69_16640 CDS
T10581
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
shin Shinella sp. XGS7
Pathway
shin00740
Riboflavin metabolism
shin00790
Folate biosynthesis
shin01100
Metabolic pathways
shin01110
Biosynthesis of secondary metabolites
shin01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
LHJ69_16640 (ribB)
00790 Folate biosynthesis
LHJ69_16640 (ribB)
Enzymes [BR:
shin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
LHJ69_16640 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
LHJ69_16640 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
V-SNARE_C
Motif
Other DBs
NCBI-ProteinID:
UDF34205
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Position
3627822..3628925
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AA seq
367 aa
AA seq
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MPISPVPELVAELAAGRMVILVDEEDRENEGDLVLAADHVSPEAINFMAKYGRGLICLTL
TRERCERLQLPPMATRNGTKHGTAFTVSIEAATGVTTGISAADRARTVQAAVARHAQASD
LVQPGHIFPLQAQDGGVLMRAGHTEAGCDLAQMAGLSPASVICEIMKDDGTMARLPDLEL
FAQEHGLKIGTIADLIEYRSRNESIITAAGSRPMQTAQGEFLARSFRDRSGALHLALSLG
HWTPEDEVLVRVHEPLSVLDLLETGPCNHSWPLPSALAEIQRAGRGVAVLLNCGEEAEGL
AERLQRPVNAGAAPRATMDLRTYGVGAQILRELGVQRMQLLGSPRRMPSMTGYGLEVSGF
RAPDNNS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcccatatcacccgttcccgagctggttgccgaactggcagccggccgcatggtcatt
ctggttgacgaggaagatcgcgagaatgaaggcgacctcgtgctcgcggccgaccatgtg
agccccgaggcgatcaatttcatggccaagtacggccgtggcctgatctgcctgaccctc
acccgcgagcgctgcgaacgcctgcagctgccgcccatggccacgcgcaacggtaccaag
catggcacggccttcaccgtgtccatcgaggccgccacaggtgtgaccaccggcatctcg
gccgccgaccgcgcccgcaccgtgcaggccgccgtggcccgccatgcccaggccagcgat
ctggtccagcctggccacatcttccccctgcaggcgcaggacggcggcgtgctgatgcgc
gccggccataccgaagccggctgcgatctggcccagatggccggtctgagccccgccagc
gtgatctgcgagatcatgaaggacgacggcaccatggcccgcctgcccgacctggagctc
ttcgcccaggagcacggcctgaagatcggcaccattgccgacctgatcgagtaccgcagc
cgcaacgaatccatcatcacggccgcgggctcgcgccccatgcagacggcccagggtgaa
ttcctggcccgcagcttccgcgaccgcagcggcgccctgcacctggccctgagcctgggc
cactggacgcccgaggacgaggtgctggtgcgcgtgcacgaaccgctgtcggtgctggac
ctgctggaaaccggcccctgcaaccattcctggcccctgcccagcgccctggccgagatc
cagcgcgccggccgcggcgtggccgtgctgctgaactgcggcgaggaggccgagggtctg
gcggagcgcctgcagcgcccggtcaacgccggtgcagctcctcgcgccaccatggacctg
cgcacctacggcgtgggggcccagatcctgcgcgagttgggtgtgcagcgcatgcagctg
ctgggcagcccgcggcgcatgcccagcatgacgggctatggcctcgaggtgagcggcttc
cgcgccccggacaacaactcttaa
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