Shinella sp. XGS7: LHJ69_17590
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Entry
LHJ69_17590 CDS
T10581
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
shin Shinella sp. XGS7
Pathway
shin00541
Biosynthesis of various nucleotide sugars
shin01100
Metabolic pathways
shin01250
Biosynthesis of nucleotide sugars
Module
shin_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LHJ69_17590 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shin01005
]
LHJ69_17590 (kdsA)
Enzymes [BR:
shin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LHJ69_17590 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
shin01005
]
Lipid A
LHJ69_17590 (kdsA)
BRITE hierarchy
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UDF34382
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Position
3812543..3813400
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AA seq
285 aa
AA seq
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MKLCDFEVGIDRPFFLIAGTCSIEGLEMSMEVAGRLKEACSALGIPLIYKGSFDKANRSS
GSSKRGVGMEAGLKILDEVRRQLHLPILTDVHDEAQVADVAAVVDVLQTPAFLCRQTDFI
RAVAKSGKPVNVKKGQFLAPWDMKNVIDKAREAAREAGLSEDRFLACERGVSFGYNNLVA
DMSSLAEMRKSGAPVVFDVTHSVQKPGGQGATSGGAREMVPVLARAGVGAGVAGLFMETH
PRPAEAWSDGPNAVPLQHMRALLEQLVALDRVVKAQPLLENDFFC
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtgcgatttcgaggtcgggatcgaccgccccttcttcctgatcgcgggcacc
tgctcgatcgagggtctggagatgtccatggaggtggcgggccggctcaaggaagcgtgc
agcgccctgggcatcccgctgatctacaagggttccttcgacaaggccaaccgctcctcc
ggcagcagcaagcgcggggtgggcatggaggccggtctgaagatcctggacgaggtgcgc
cgccagctgcatctgcccatcctcaccgatgtgcatgacgaagcccaggtggccgatgtg
gccgccgtcgtggacgtgctgcagaccccggcctttctgtgccgccagaccgatttcatc
cgcgccgtggccaagtccggcaagccggtgaacgtcaagaagggccagttcctggcgccc
tgggacatgaagaacgtcatcgacaaggcacgcgaggcggcccgcgaggccggcctctcg
gaggaccgcttcctggcctgcgagcgcggcgtgagcttcggctacaacaacctcgtggcc
gatatgagcagcctggccgagatgcgcaagtccggcgcccccgtggtgttcgacgtgacc
cactcggtgcaaaagcccggcggccagggtgccaccagcggcggcgcccgcgagatggtg
ccggtgctggcgcgcgccggcgtgggtgccggcgtggcgggcctcttcatggaaacccat
ccgcgcccggccgaggcctggtcggacggccccaacgccgtgcccctgcagcatatgcgg
gcgctgctggagcagctggtcgccctggaccgcgtggtcaaggcccagcccctgctggaa
aacgacttcttctgctga
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