Shinella sp. XGS7: LHJ69_17790
Help
Entry
LHJ69_17790 CDS
T10581
Name
(GenBank) arginine/lysine/ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
shin Shinella sp. XGS7
Pathway
shin00330
Arginine and proline metabolism
shin01100
Metabolic pathways
shin01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LHJ69_17790
Enzymes [BR:
shin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
LHJ69_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
WHH
Beta_elim_lyase
Lipase_GDSL_2
DUF5623
Motif
Other DBs
NCBI-ProteinID:
UDF34422
LinkDB
All DBs
Position
complement(3852198..3854462)
Genome browser
AA seq
754 aa
AA seq
DB search
MLRFRFPIVIIDEDYRSENTSGLGIRALADAIQKEGFEVLGVTSYGDLSQFAQQQSRASA
FILSIDDNEFTPGPELDPAVVNLRKFIEEIRFKNADIPIYVYGETRTSQHLPNDVLRELH
GFIHMFEDTPEFVARHIIREARSYLDGLAPPFFKALMDYAQDGSYSWHCPGHSGGVAFLK
SPVGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAASEKNAARIFNADHCFFVTNGT
STSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAVPVFMTPTRNHYGIIGPIPESEF
SPETIKKKIAKNPLLKGVDVKKVKPRIMTLTQSTYDGVLYNTETIKSKLDGWIDTLHFDE
AWLPHAAFHTFYGSYHAMGKNRPRPKTAMVYATQSTHKLLAGLSQASQVLVQDSQNVKLD
KHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESLAEALDFRRAMRKVEKD
YGKSDWWFKVWGPDRPLAAEGVGKPADWMLKANEKWHGFGSIEAGFNMLDPIKSTIITPG
LDMSGKFAKSGIPASIVTKFLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLTALQQFK
DDYDKNAPLWRIMPEFVAAQPRYERMGLRDLCQSIHEAYAQGDIARLTTEVYLSDLEPAM
KPSDAYAHIAQRKTERVAIDKLEGRVTTSLLTPYPPGIPLLIPGERFNKKIVDYLKFTRD
FNAKFPGFATDVHGLVAEQGEDGQTRYFVDCVAK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctttcgcttccccatcgtcatcatcgacgaggactatcgctccgagaacacc
tcgggtttgggcatccgcgccctggcggatgccatccagaaagagggcttcgaggtgctg
ggcgtgaccagctatggcgacctcagccagttcgcccaacagcaaagccgcgccagcgcc
ttcatcctgtccatcgatgacaacgagttcacgcccggcccggagctggatccggcggtg
gtgaacctgcgcaagttcatcgaggagatccgcttcaagaatgcggacattcccatctac
gtctacggcgaaacgcgcacctcccagcatctgcccaacgatgtgctgcgcgagctgcat
ggcttcatccatatgttcgaggacacgccggagttcgtggcccgccacatcatccgcgag
gcgcgcagctacctcgacggcctggcgccgcccttcttcaaggcgctgatggactacgcg
caagacggctcctacagctggcactgcccgggtcactccggcggcgtggccttcctgaag
agtccggtgggccagatgttccaccagttcttcggcgagaacatgctgcgcgccgacgtc
tgcaatgcggtggaggagctgggccagctgcttgaccacaccggtccggtggccgcctcc
gagaagaatgccgcgcgcatcttcaatgccgaccactgcttcttcgtcaccaacggcacc
agcacctccaacaagatggtctggcaccacacggtggcgccgggtgatgtggtggtggtg
gatcgcaactgccacaagagcatcctgcacagcatcatcatgaccggcgccgtgccggtc
ttcatgacgcccacgcgcaaccattacggcatcatcggccccatcccggagagcgagttc
tcgccggagaccatcaagaagaagatcgccaagaacccgctgctcaagggggtggacgtc
aagaaggtcaagccgcgcatcatgacgctgacccagagcacctatgacggcgtgctctac
aacaccgagaccatcaagagcaagctggacggctggatcgacaccctgcatttcgacgag
gcctggctgccgcacgcggctttccacaccttctatggctcctaccatgccatgggcaag
aaccgcccgcgcccgaagacggccatggtctatgccacccagtccacccacaagctgctg
gccggtctgagccaggcttcgcaggtgctggtgcaggactcgcagaacgtgaagctggac
aagcatctgttcaacgaggcctatctgatgcacacctcgaccagcccgcagtacagcatc
atcgccagctgtgatgtggccgccgccatgatggagccgcccggcggcaccgccctggtg
gaggagagcctggccgaagctctggacttccgccgtgccatgcgcaaggtggagaaggat
tacggcaagtccgactggtggttcaaggtctggggcccggatcgtccgctggccgccgag
ggcgtgggcaagcccgccgactggatgctcaaggccaatgagaagtggcacggcttcggc
tccatcgaggccggcttcaatatgctggacccgatcaagtccaccatcatcacgcccggc
ctggacatgagcggcaagttcgccaagagcggcatcccggccagcatcgtcaccaagttc
ctagccgagcacggcgtggtggtggagaagacgggcctgtacagcttcttcatcatgttc
accatcggcatcaccaagggccgctggaacaccctgctgaccgcgctgcagcagttcaag
gacgactacgacaagaatgcgccgctgtggcgcatcatgccggagttcgtggccgcccag
ccgcgctacgagcgcatgggtctgcgcgatctgtgccagagcatccacgaggcctatgcc
cagggtgacatcgcccgcctgaccaccgaggtctacctctcggacctggagccggccatg
aagcccagcgatgcctatgcccacatcgcccagcgcaagaccgagcgcgtggccatcgac
aagctggaaggtcgtgtcaccacctcgctgctgacgccttacccgcctggcattcccctg
ctgatcccgggcgagcgcttcaacaagaagatcgtggactacctgaagttcacccgcgac
ttcaatgccaagttcccgggctttgccaccgatgtgcacggtctggtggccgagcagggc
gaagacggccagacgcgctacttcgtggactgcgtggccaagtaa
DBGET
integrated database retrieval system
