Shinella sp. XGS7: LHJ69_18115
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Entry
LHJ69_18115 CDS
T10581
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
shin Shinella sp. XGS7
Pathway
shin03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LHJ69_18115 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shin03011
]
LHJ69_18115 (rpsA)
Ribosome [BR:
shin03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LHJ69_18115 (rpsA)
Bacteria
LHJ69_18115 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UDF34482
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Position
3936561..3938273
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AA seq
570 aa
AA seq
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MSQIQNATGGESFAALFEESLQKADMRSGEVISAEVVRIDYNFVVVNAGLKSEAYVPIDE
FKNDQGELEVHVGDFVSVAIDAIENGYGDTILSRDKAKRLASWLALENALESGEFVTGTV
SGKVKGGLTVLVNGIRAFLPGSLLDTRPVKDMSPFEGKTMEFKVIKLDRKRNNVVLSRRA
VVEASMGEERAKLLETLSEGAIVNGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVRHPS
EVVQVGQELTAKVLKFDAEKNRVSLGLKQLGDDPWFGVARRYPTGTRLFGKVTNITDYGA
FVELEPGIEGLIHISEMSWTKKNVAPSKVVSLGDEVEVMVLEIDEDKRRISLGMKQCKAN
PWEEFAENVKRGDRVKGPVKSITDFGVFVGLAQGIDGLVHLSDLSWQETGEAAVRNFKKG
QEVEAIVLAVDVERERISLGIKQLDADPFTSYTSVNDRGMSVTGKVKTVDARGAEIELAD
DVLGYLRASEISRDRVEDARNVLKEGDEVTAVIVNIDRKTRNIQLSIKAKDNADQQEAMQ
RLSATNERENAGTTSLGALLRAKLDNQNNG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaatccaaaacgccaccggtggtgagtccttcgccgctctgttcgaagagtcg
ctgcaaaaagccgacatgcgctcgggcgaggtcatctcggccgaagtcgtgcgcatcgac
tacaacttcgtggtggtgaatgccggcctgaagtcggaagcctacgtgcccatcgacgag
ttcaagaacgaccagggcgaactggaagttcacgtcggtgacttcgtctcggtggccatc
gatgccatcgaaaacggctacggcgacaccatcctgtcgcgcgacaaggccaagcgcctg
gcttcctggctggctctggagaacgcgctggagtccggcgagttcgtgaccggcaccgtc
tccggcaaggtcaagggcggcctgaccgtcctggtcaacggcattcgcgccttcctgccc
ggatcgctcctggacacccgcccggtgaaggacatgagcccgttcgagggcaagaccatg
gaattcaaggtcatcaagctcgaccgcaagcgcaacaacgttgtgctgtcgcgtcgcgcc
gtggtggaagcctccatgggtgaagaacgcgccaagctgctggaaaccctgtccgaaggc
gccatcgtcaacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctcggc
ggcatcgacggcctgctgcacgtcaccgacatggcctggcgccgcgtccgtcacccgagc
gaagtcgttcaggtcggccaggaactgaccgccaaggtcctgaagttcgacgccgagaag
aaccgcgtgtcgctgggtctgaagcagctgggcgacgacccctggttcggcgtggcccgt
cgctacccgactggcacccgcctgttcggcaaggtcacgaacatcaccgactacggtgcg
ttcgtcgagctggaaccgggcatcgaaggcctgatccacatctccgaaatgtcctggacg
aagaagaacgtggctccctccaaggtcgtctccctgggcgacgaagtggaagtcatggtc
ctggagatcgacgaagacaagcgtcgcatctcgctgggcatgaagcagtgcaaggccaac
ccctgggaagagttcgccgagaacgtcaagcgcggcgaccgcgtcaagggcccggtcaag
tccatcaccgacttcggcgtgttcgtgggcctggcccagggcatcgacggtctggtgcac
ctgtccgacctgtcctggcaagagactggcgaagctgccgtgcgcaacttcaagaagggc
caggaagtcgaagccatcgtgctggccgtggacgtcgagcgcgagcgcatctccctgggc
atcaagcaactggacgccgatccgttcaccagctacacctcggtcaacgaccgcggcatg
tcggtgaccggtaaggtcaagaccgttgacgcccgtggcgccgagatcgaactggccgac
gacgtgctgggctatctgcgtgcttccgaaatcagccgcgaccgcgtcgaagacgcccgc
aatgtgctgaaggaaggcgacgaagtgacggccgtgatcgtcaacatcgaccgcaagacc
cgcaacatccagctgtcgatcaaggccaaggacaacgctgaccagcaagaagccatgcag
cgcctgtccgcgaccaacgagcgcgagaacgccggtaccaccagcctgggcgccctgctg
cgtgccaagctggacaaccagaacaacggctga
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