Shinella sp. XGS7: LHJ69_19130
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Entry
LHJ69_19130 CDS
T10581
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
shin Shinella sp. XGS7
Pathway
shin02010
ABC transporters
shin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LHJ69_19130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHJ69_19130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_19130
Transporters [BR:
shin02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LHJ69_19130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
DUF5828
Motif
Other DBs
NCBI-ProteinID:
UDF34670
LinkDB
All DBs
Position
complement(4174269..4175459)
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AA seq
396 aa
AA seq
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MSKKTTNAVLCAALMLGLGAGAGTAWAADKVKIGLLSTLSGPGAGLGVDIRDGFNLAVKQ
AGGKFGGLPVELVIADDQQNPDVAKQTADRLLKRDKVDFMTGIVFSNIMLAVGPSVFDAK
VPYISANAGPSQYAGEQCNPYFFNVAWQNDNLHEAVGKTVMDKGFKKVVVLAPNYPAGKD
AINGFKRFYKGAVADEIYTKLGQLDYSAELAQARAAKPDAMYIFLPGGMGINFIKQFVGA
GLSKDITLFGPGFSADEDVIKAVGEPMLGMFNSSHWAHDMDNAANKKFVADFQKEFGRLP
SLYASQGYDAGLSIAAAVRDVKGKVEDREAVLKALKAARFESVRGPFKYNNNQYPVQDYY
LRVITKDGQGRVTNKTLGKIFSNHADAYAASCKMKS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagacgacgaatgctgtgctgtgtgcggccctgatgctgggtctgggtgcc
ggggccggcacggcctgggcggccgacaaggtcaagatcggtctgctgtctaccctctcc
ggccccggtgccggcctgggcgtggacatccgcgacggcttcaatctcgccgtcaagcag
gccgggggcaagttcggcggcctgccggtggagctggtcatcgctgacgaccagcagaac
cccgatgtggccaagcagacggccgaccgcctgctcaagcgcgacaaggtcgacttcatg
accggcatcgtgttctccaacatcatgctggccgtgggccccagcgtcttcgacgccaag
gtgccctatatcagcgccaatgccggcccctcgcagtacgccggcgagcagtgcaatcct
tacttcttcaatgtggcttggcagaacgacaacctgcatgaggcggtcggcaagaccgtg
atggacaagggcttcaagaaggtggtggtgctggcgcccaactaccccgccggcaaggac
gccatcaacggcttcaagcggttctacaagggcgcggtggcggacgagatctacaccaag
ctcggccagctggactactcggccgagctggcccaggcccgcgccgccaagccggacgcc
atgtacatcttcctgcccgggggcatgggcatcaacttcatcaagcagttcgtgggtgcc
ggcctctccaaggacatcacgctcttcggccccggcttctcggccgacgaggacgtgatc
aaggccgtaggcgagcccatgctgggcatgttcaacagctcgcactgggcgcatgacatg
gacaacgccgcgaacaagaagttcgtggccgacttccagaaggagttcggacgcctgccc
tcgctctacgcctcccagggctatgacgccggcctgtccatcgccgccgcggtgcgcgat
gtgaagggcaaggtcgaggaccgcgaggcggtgctcaaggccctgaaggcggcgcgcttc
gagtcggtgcgcggccccttcaagtacaacaacaaccagtacccggtgcaggactactac
ctgcgcgtcatcaccaaggacggccagggccgcgtcaccaacaagaccctgggcaagatc
ttcagcaaccacgcggatgcttacgcagcctcgtgcaagatgaagagctga
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