Shinella sp. XGS7: LHJ69_19295
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Entry
LHJ69_19295 CDS
T10581
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
shin Shinella sp. XGS7
Pathway
shin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LHJ69_19295 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shin01007
]
LHJ69_19295 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shin03016
]
LHJ69_19295 (serS)
Enzymes [BR:
shin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LHJ69_19295 (serS)
Amino acid related enzymes [BR:
shin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LHJ69_19295 (serS)
Transfer RNA biogenesis [BR:
shin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LHJ69_19295 (serS)
Prokaryotic type
LHJ69_19295 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ARB_05566_C
SPC25_N
DUF4140
Motif
Other DBs
NCBI-ProteinID:
UDF34698
LinkDB
All DBs
Position
complement(4208809..4210104)
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AA seq
431 aa
AA seq
DB search
MLDITLLRKDLDAVIARLNARKTPQPYLDVERYKALEAERKGVQTRTEELQSRRNSLSKQ
IGMAKGKGEDASALMAEVGGIADELKAGAERLEAIQLELNTLLMSVPNLPDESVPAGADE
TGNVEVRRWGTPRSFDFEVKDHVDLGAPLGLDFETGAKLSGSRFTFLKGPVARLHRALAQ
FMLDVQTEEHGYTECYTPYIVNREVLEGTGQLPKFKEDMFWVLRGGDDQAAEQYLISTSE
ISLTNTVREQVLDAAELPIKLTAHSPCFRSEAGSAGRDTRGLIRQHQFDKVEMVRIEQPE
HSMAALEEMTLHAEAILQKLGLPYRTVLLCSGDMGFGAVKTYDLEVWVPAQNTYREISSC
SNMGAFQARRMQARFKNAAGKNELVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR
PYLGGKALLQA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatatcaccctgctgcgcaaggacctggatgcggtcattgcgcgcctgaatgcc
cgcaaaaccccccagccctatctggacgtggagcgctacaaggccctggaggccgagcgc
aagggcgtgcagacccgcaccgaggagctgcagtcgcgccgcaacagcctgtccaagcag
atcggcatggccaagggcaagggcgaggacgcctcggccctgatggccgaggtgggcggt
atcgccgatgagctcaaggccggcgccgagcgcctggaggccatccagctcgagctcaac
accctgctgatgagcgtgcccaatctgccggacgagagcgtgccggccggcgcggacgaa
accggcaatgtggaagtgcgccgctggggcacgccgcgcagcttcgacttcgaggtcaag
gaccatgtggacctgggcgcgcccctgggcctggacttcgagaccggggccaagctcagc
ggctcgcgcttcaccttcctgaaggggccggtggcccgcctgcaccgggcgctggcccag
ttcatgctggacgtgcagaccgaggagcatggctacaccgagtgctacacgccctatatc
gtcaaccgcgaggtgctggaaggcacgggccagctgcccaagttcaaggaagacatgttc
tgggtgctgcgtggcggcgatgaccaggcggccgagcagtacctgatctccacctcggag
atctcgctgaccaacaccgtgcgcgagcaggtgctggatgcggccgagctgcccatcaag
ctcacggcccacagcccctgcttccgctcggaggccggcagcgccggtcgcgacacccgc
ggcctgatccgccagcaccagttcgacaaggtcgagatggtgcgcatcgagcagcccgag
cacagcatggccgcgctggaggagatgaccctgcacgccgaagccatcctgcagaagctg
ggcctgccctaccgcacggtgctgctgtgcagcggtgatatgggcttcggcgcggtgaag
acctatgacctggaggtctgggtgccggcgcagaacacctaccgcgagatcagctcctgc
tcgaatatgggcgccttccaggcccgtcgcatgcaggcgcgcttcaagaacgcggccggc
aagaacgagctggtgcacacgctcaacggctcgggcctggcggtgggccgcaccctggtg
gccgtgctggagaactaccagaacgccgatggcagcatcacggtgcccgaggtgctgcgc
ccctacctgggcggcaaggcgctgctgcaggcctga
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