Shinella sp. XGS7: LHJ69_19755
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Entry
LHJ69_19755 CDS
T10581
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shin03110
]
LHJ69_19755 (clpB)
Chaperones and folding catalysts [BR:
shin03110
]
Heat shock proteins
HSP100
LHJ69_19755 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
nSTAND3
IstB_IS21
TniB
Sigma54_activat
AAA_7
AAA_18
AAA_25
AAA_28
AAA_14
AAA_3
ABC_tran
AAA_24
NACHT
T2SSE
DNA_pol3_delta2
NBD_SMAX1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UDF34779
LinkDB
All DBs
Position
complement(4302538..4305135)
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AA seq
865 aa
AA seq
DB search
MRVDKLTTRFQEALAEAQSLAVTRDNPYIEPAHLLSAMLAQADGPRALLERAGVKVPALK
AALDSILAGLPQVQGEGQQVQPSRDLIGLLQSAEKEAAKRGDHYIASEMFLLVLAEAKSD
LAGIARGHGLTRKALESAVEAVRGGQKVDSQEAEGQREALKKFARDLTADAREGRLDPVI
GRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKEKKLMALD
MGALIAGAKYRGEFEERLKAVLAEVQAEDGEIILFIDEMHTLVGAGKADGAMDASNLLKP
ALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVDEPTVEDTISILRGLKEKYEQHH
KVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRIIQ
LKIEREALKKEQDEASQRRLGLIEEELLKLQREYNDLEEIWTHEKAQAQGSAHVKEEIDK
IKFQIEELKRKGDFNKVAELQYGKLPELEKRLKEAQDKETGKAAGGAGRAQLLRTLVGAE
EIAEVVSRATGIPVSKLMQGERDKLLKMEAKLHERVVGQDEAIVAVADAVRRARAGLQDP
NRPIGSFIFLGPTGVGKTELTKALARFLFDDETAIQRMDMSEYMEKHSVARLIGAPPGYV
GYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTMI
IMTSNLGSQHIMQLAGESEEVIREAVWGEVKSHFRPEFLNRIDETVIFHALGAAHIKSIA
RIQLAQLEARLDKLEMKLDVSEEALDELAKVGFDPVFGARPLKRAIQQRIENPLSKLILQ
GRFGPKDLIPVGIEGGEFSFGRVVH
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcgacaaacttaccacccgcttccaggaagccctggccgaggcccagagcttg
gccgtcacccgcgacaacccctatatcgagccggcccatctgctcagcgccatgctggcc
caggcggacggtccgcgtgcgctgctggagcgtgccggcgtcaaggtgcccgcgctcaag
gcggcgctggacagcatcctggccggcctgccccaggtgcagggcgagggccagcaggtc
cagcccagccgtgacctgatcggcctgctgcagtcggccgagaaggaggccgccaagcgc
ggcgaccactacatcgccagcgagatgttcctgctggtgctggccgaggccaagagcgat
ctggccggcatcgcgcgcggccatggcctgacccgcaaggccttggagagcgcggtggaa
gccgtgcgcggcggccagaaggtggacagccaggaggccgagggccagcgcgaggcgctg
aagaaattcgcccgtgacctcacggccgatgcgcgcgaaggccgtctcgacccggttatc
ggccgcgacgacgaaatccgccgcaccatccaggtcctctcgcgccgcacgaagaacaat
cccgtgctcatcggcgagcccggcgtcggcaagaccgccatcgccgaaggcctcgcgttg
cgtatcgtcaatggcgacgtgccggagagcctgaaggaaaagaagctgatggcgctcgac
atgggcgcgctgatcgccggtgcgaaatatcgcggtgagttcgaggaacgcctgaaggcc
gtgctggccgaagtgcaggcggaagacggcgagatcatcctcttcatcgacgaaatgcat
acgctggtcggcgccggcaaggcggatggggcgatggacgcctccaacctgctgaagccc
gcgcttgcccgcggcgaactgcactgcgtgggcgcgaccacgctcgacgagtatcgcaag
catgtcgagaaggacgccgcgcttgcccgccggttccagcccgtcatggtggacgagccg
accgtcgaggacacgatctcgatcctgcgcggcctcaaggaaaagtacgagcagcaccac
aaggtccggatttccgactcggccctggttgctgccgcgacgctttccaaccgctacatc
acggatcgtttcctgccggacaaggcgatcgacctgatggacgaagcggcctcgcggctg
cgcatgcaggtcgattccaaaccggaagagctcgacgaactcgaccgccgcatcatccag
ctcaagatcgagcgcgaggccctgaagaaggagcaggacgaggcctcgcagcgccgcctg
ggcctgatcgaggaagagctgctcaagctgcagcgcgagtacaacgacctggaagagatc
tggacccatgaaaaggcccaggcccagggcagcgcccatgtgaaggaagagatcgacaag
atcaagttccagatcgaggagctcaagcgcaagggcgacttcaacaaggtggccgagctg
cagtacggcaagctgcccgagctggagaagcgcctcaaggaagcgcaggacaaggaaacc
ggcaaggccgccggcggcgcgggccgcgcccagctgctgcgcaccctggtgggggccgag
gagatcgccgaggtggtctcgcgcgccaccggcatcccggtgtccaagctgatgcagggc
gaacgcgacaagctgctcaagatggaggccaagctgcatgagcgcgtggtgggccaggac
gaggccatcgtggccgtggccgatgccgttcgccgtgcccgcgccggcctgcaggatccg
aaccggccgatcggctcgttcatcttcctcggacccaccggcgtcggcaagacggagctg
accaaggcgctcgcccgtttcctcttcgacgacgagacggcgatccagcgcatggacatg
tcggaatacatggagaagcactccgtggcccggctgatcggtgcgcctcccggctatgtc
ggctatgaggaaggcggcgccctgacggaatccgttcgccgccggccctatcaggtcgtg
ctgttcgacgagatcgagaaggcgcatccggatgtcttcaacgtcctgctgcaggtcctc
gatgatggccgcctgaccgacggccagggtcgcaccgtggacttccgcaacacgatgatc
atcatgacctcgaacctcggctcccagcacatcatgcagctggcgggtgagtcggaggag
gtgatacgcgaggcggtctggggcgaggtcaagagccacttccggcccgagttcctgaac
cgcatcgacgagacggtgatcttccacgccctgggcgcggcacacatcaaatccatcgca
cgcatccagctggcccagctcgaggcccgtctggacaagctggagatgaagctggatgtg
agcgaggaagccctggacgagctggccaaggtgggcttcgatccggtgttcggcgcccgg
ccgctcaagcgcgccatccagcagcgcatcgagaaccctctctccaagctcatcctgcag
ggccgcttcgggcccaaggacctgatcccggtggggatcgagggcggcgagttcagcttc
gggcgcgtggtgcactga
DBGET
integrated database retrieval system
