Shinella sp. XGS7: LHJ69_19850
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Entry
LHJ69_19850 CDS
T10581
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shin03012
]
LHJ69_19850 (selB)
Translation factors [BR:
shin03012
]
Eukaryotic type
Elongation factors
LHJ69_19850 (selB)
Prokaryotic type
LHJ69_19850 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
MMR_HSR1
SRPRB
RsgA_GTPase
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
UDF34796
LinkDB
All DBs
Position
complement(4319330..4321267)
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AA seq
645 aa
AA seq
DB search
MIVGTAGHIDHGKTTLVRALTGVDTDRLPEEKKRGISIELGYAFLDIPADGQRIGFIDVP
GHERLVHTMLAGATGIDHALLLVAADDGVMPQTCEHLAVLSLLGLARGAVVITKCDRADA
ERLAALRGEIAALLAGSGLAGAPVFEVSAPTGQGLAALREHLLAAARAHAAARQGAAERG
QAFRLAIDRAFSLDGVGTVVTGTVHAGHTRLGEELALAPDSRARRARVRSLHAQNQAVEA
AQAGQRCAVNLAGLAKDEIERGQWLCEPAVALATERLDARLRLWPGEAKALRSGTPVHVH
LGARAVLGSVALLEGDQLQPGAEALVQLVLREPVGAWRGDRVVLRDASASRTLAGGVVLD
PFAPTRYRRTPERLAELAALQAPEPAQRLQTLLQAAPLGLDLARFARAEGLRREALPEIV
AALRVEEGEAAWALSEAGAAQITDKLLAALRDFHARQPDELGPEAARLRRLTSPRLPEPL
WRGLLARLREQGVLALRGAFVHLPEHGVRLSAAEQRIAQKVAPQLAQAGFEGAWARDLAR
DSAEPEALMRTTLARLAQQGEVHQVVKDLYYDLGHMRRLAATAREIAAHSEGQVLAAAFR
DATGLGRKRAIQILEYFDRVGLLRRVGDVHKLRSESTLFAAESRA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggcaccgcaggacatatcgaccacggcaagaccaccctggtgagagcgctc
accggggtggacaccgaccgcctgccggaagagaagaagcgcggcatcagcatcgagctg
ggctacgccttcctggacattccggccgatggccagcgcatcggcttcatcgatgtgcct
ggccatgagcgcctggtccacaccatgctggccggggccaccggcatcgaccatgccctg
ctgctggtggcggccgatgacggcgtgatgccccagacctgcgagcacctggccgtgctc
agcctgctgggcctcgcgcgcggcgcggtcgtcatcaccaaatgcgaccgggccgatgca
gaacgtctggccgccctgcgcggcgagatcgcggccctgctggcgggcagcggtctggcc
ggggcgccggtgttcgaggtcagcgcgcccacgggccagggcctggccgcgctgcgcgag
catctgctggcggccgcccgggcgcatgcggccgcgcggcagggcgcggccgagcgtggg
caggccttccgcctggccatcgaccgcgctttcagcctggatggcgtgggcaccgtggtc
accggcaccgtgcatgcgggacacacccgcctgggcgaggagctggccctggcacccgac
agccgcgcccggcgcgcccgcgtgcgcagcctgcatgcgcagaaccaggcggtggaagcg
gcccaggccggccagcgctgcgccgtcaatctggcgggcctggccaaggacgagatcgag
cgcggccagtggctgtgcgagcccgccgtggccctggccaccgagcgcctggatgcgcga
ctgcgcctgtggcccggcgaggccaaggccctgcgttcgggcacgcccgtgcatgtgcat
ctgggtgcgcgcgcggtgctgggcagcgtggccctgctggagggcgatcagctccagccc
ggcgccgaagccctggtgcagttggtgctgcgcgagcccgtgggcgcctggcgcggcgac
cgcgtggtgctgcgcgatgcctcggccagccgcaccctggccggtggtgtggtgctcgat
ccctttgcgcccacgcgctaccgccgcacgcccgagcgcctggccgagctggcggccctg
caggcgcccgagcccgcccagcgcctgcagaccctgctgcaggccgcgcccctgggcctg
gacctggcgcgctttgcccgcgccgagggcctgcgccgcgaggccctgcccgagatcgtc
gcggccctgcgggtggaggagggcgaggccgcctgggctctgtccgaggccggcgcggcc
cagatcactgacaagctgctggccgcgctgcgcgacttccatgcccgccagcccgatgag
ctggggcccgaggccgcgcgcctgcgccgcctgacatcgccgcgcctgcccgagcccctg
tggcgcggcctgctggcccgcctgcgcgaacagggcgtgctcgccctgcgcggcgccttt
gtgcacctgcccgagcatggggtgcggctctcggccgccgagcagcgcatcgcgcagaag
gtggcgcctcagcttgcccaggccggtttcgagggcgcctgggcccgcgatctggcgcgc
gacagcgccgagcccgaggccctgatgcgcaccaccctggctcgcctggcccagcagggc
gaggtgcatcaagtggtgaaagacctctattacgacctgggccatatgcgcagactggcg
gccacggcgcgcgagatcgcggcgcacagcgagggtcaggtcttggccgcggccttccgc
gacgccacgggcctgggccgcaagcgcgcgatccagatcctggaatacttcgaccgcgtg
ggcctgctgcgccgggtgggcgatgtgcacaagctgcgcagcgagtccaccctgttcgcc
gcggaaagcagggcatga
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