Shinella sp. XGS7: LHJ69_20315
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Entry
LHJ69_20315 CDS
T10581
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
shin Shinella sp. XGS7
Pathway
shin03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHJ69_20315 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shin03032
]
LHJ69_20315 (dnaB)
Enzymes [BR:
shin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LHJ69_20315 (dnaB)
DNA replication proteins [BR:
shin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LHJ69_20315 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
Motif
Other DBs
NCBI-ProteinID:
UDF34880
LinkDB
All DBs
Position
complement(4428496..4429926)
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AA seq
476 aa
AA seq
DB search
MSAIFSAPGSSPTPGSDDEVARLRVPPHSVEAEQSVLGGLLIDNSAWDKAGDLLQETDFY
RFEHKQIFAAIGKLINGGKPADVVTVFEELTSLGKAADCGGLAYLNALAQSVPSAANLRR
YAEIVRERAVLRKLVQTSDEIATAAMNPQGRPAKEIVDEAEGKIFRINEEGNKGAQGFHS
MDRLVVDLIDRVNELAEQGAEDVTGVRTGFYDLDRMTAGLQPGDLIILAARPSMGKTAFA
INIGENVAIDEGLPVVIYSMEMGAAQLALRMVGSIGRIDQGHLRTGRLTDDEWGRLSEAV
DKLGKASIYIDESPGLSPSEVRARARRQARISGQLGLIIIDYLQLMSGNSGSSDENRAAI
VGEISRGLKALAKELRCPVIALSQLNRSVETRPDKRPMMSDLRESGAIEQDADIIMFIYR
DEYYTKDQCQEPGVAEIIIAKQRNGPVGTVKLAFQRMHTKFENLAPGYTGPAGAEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgatcttttccgcacccggttcttcccccactcccggctcggacgacgaagtc
gcccgcctgcgcgtgccgccgcactcggtagaagccgagcagagcgtgctgggcggcttg
ctgatcgacaacagcgcctgggacaaggcgggcgatctgctgcaggaaacggacttctac
cgcttcgagcacaagcagatctttgccgccatcggcaagctgatcaacggcggcaagccg
gccgacgtggtgacggtcttcgaggagctgacctcgctgggcaaggcggccgactgcggt
ggcctggcctatctcaacgccctggcccagagcgtgcccagcgcggccaatctgcgccgc
tacgcggaaatcgtgcgcgagcgcgccgtgctgcgcaagctggtgcagacctcggacgag
atcgccaccgcggccatgaacccccagggccggccggccaaggagatcgtggacgaggcc
gagggcaagatcttccgcatcaacgaagagggcaacaagggcgcccagggcttccacagc
atggaccgcctggtggtggacctgatcgaccgcgtcaacgaactggccgagcagggcgcc
gaggacgtgaccggcgtgcgcaccggcttctacgatctggaccgcatgaccgcgggcctg
cagccgggcgacctgatcatcctggccgcgcgcccctccatgggcaagaccgccttcgcc
atcaatatcggcgagaacgtggccatcgacgaaggcctgcccgtggtcatctactccatg
gaaatgggcgcggcccagctggccttgcgtatggtgggctccatcggccgcatcgaccag
ggtcatctgcgcaccggccgcctgaccgacgacgagtggggccgcctctccgaggccgtg
gacaagctgggcaaggccagcatctacatcgacgagagcccgggcctgagcccctccgag
gtgcgtgcccgtgcacgccgccaggcccgcatcagcggccagctgggcctgatcatcatc
gactacctgcagctgatgagcggcaacagcggcagcagcgacgagaaccgcgccgccatc
gtgggcgagatctcgcggggcctgaaggccctggccaaggagctgcgctgcccggtgatc
gcgctctcccagctcaaccgctcggtcgaaacgcgccccgacaagcgtcccatgatgtcc
gacctgcgcgaatccggcgccatcgagcaggatgcggacatcatcatgttcatctaccgc
gatgagtactacaccaaggaccagtgccaggagccgggtgtggccgagatcatcatcgcc
aagcagcgtaacggcccggtgggcacggtgaagctggccttccagcgcatgcacaccaag
ttcgagaacctggccccgggctacaccggcccggccggcgccgagtactga
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