Shinella sp. XGS7: LHJ69_20580
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Entry
LHJ69_20580 CDS
T10581
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shin03009
]
LHJ69_20580
Enzymes [BR:
shin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LHJ69_20580
Ribosome biogenesis [BR:
shin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LHJ69_20580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
UDF34930
LinkDB
All DBs
Position
complement(4482309..4484330)
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AA seq
673 aa
AA seq
DB search
MNSNDNDMNPPAPEADAAAAAPKRRRSTRAAAPAETAAPEAAAPVAADEAAKPVKPRAPR
KTAAKKVVASAESAGEALAERLPAASAEPAVAEAAPAPKRRSPRKSAAAEGEAQAPAAVE
VQPAPVEPVVAQASESAADSATEGESSGDAADGEGRRGRNRRRGRRRGEGGAEGGEGESL
EAGETEGDDGQEAGAPRRAEPAPEELLAAVGERFAQVLAGEFDGSEAEEAATSEPAAEAE
SKRVLAPEPDAPKLQKVLAQAGVGSRRDIEDMIAEGKIEVNGEVAHIGQRISFGDRVAVN
GKQIRVRISPPAPRILAYHKPTGEVVTFNDPEGRPTVFRSLPRLHQGKWQSVGRLDLNTE
GLLLFTNSGELANQLMHPRFGVEREYAVRVLGSLNEEQRARLLEGVQIEGQSAAFKSIVD
GGGEGANRWYRVVITEGRNREVRKLFEAVGMVVSRLIRIRYGTVVLPRGLKRGVWVELGE
DDVRIIRRLAGGPQQARGERQQQARDEQAQQRGKRNRGGKGPRPSRPDAPPQPRQQAAER
GPDRAQDRGRERSRDSDYEDDDFIPHNINPLEQTFDRRFASSGKRGFPAGFGAGGSGAQG
TGAPGRGGQGNRGKGGGGGNGPREPDPMQTSVGYIGADAFTRRGGRGGGGGGGNRSGGGG
GGGNRGGGGRGRR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaacgacaacgacatgaacccgccggcccccgaggccgatgccgctgccgcg
gcgcccaagcgccgccgcagcacccgcgcggccgcgcccgccgagaccgcggcccccgag
gccgcggccccggtggcggcggatgaggctgccaagcccgtgaagccgcgcgcgccgcgc
aagaccgccgccaagaaggtggtcgcgtcggccgagtcggccggcgaggctctggccgag
cggttgcctgccgcatccgccgagccggcggttgccgaagcggcgcccgcgcccaagcgc
cgcagcccgcgcaagagcgcggcggcggagggtgaggcccaggcgcctgccgcggtcgag
gtccagccggcaccggtcgagccggtggtggctcaggcctccgaatccgcggccgactcc
gccaccgagggcgagtcgtccggcgatgccgcggatggcgaaggccgtcgtggtcgcaat
cgccgccgcggtcgccgtcgtggcgaaggcggtgccgaagggggcgagggtgagtcgctc
gaggccggcgagaccgagggcgacgacgggcaggaggctggcgccccgcgccgtgccgag
cccgcgcccgaggagctgctggctgccgtgggcgagcgctttgcccaggtgctggccggc
gagttcgatggtagcgaggccgaggaggctgccaccagcgagccggctgccgaggccgag
agcaagcgcgtgctggcgcccgagcccgatgcgcccaagctgcagaaggtgctggcccag
gccggcgtcggctcgcgccgcgacatcgaggacatgattgccgaaggcaagatcgaggtg
aatggcgaggtggcccatatcggccagcgcatctccttcggtgaccgcgtggccgtcaac
ggcaagcagatccgcgtgcgcatctcgccgccggcgccccgcatcctggcctatcacaag
cccaccggcgaggtcgtgaccttcaatgatcccgaaggccgccccaccgtgttccgcagc
ctgccccgactgcatcagggcaagtggcagtcggtcggtcgcctggacctgaataccgaa
ggcctgctgctgttcaccaactccggcgagctggccaatcagctgatgcacccgcgcttt
ggcgtggagcgcgagtacgcggtgcgcgtgctgggttcgctgaatgaagagcagcgcgcc
cgcctgctggaaggtgtgcagatcgagggccagtccgcggccttcaagagcatcgtggac
ggcggcggcgaaggcgccaaccgctggtatcgcgtggtcatcaccgaaggccgcaaccgc
gaagtgcgcaagctcttcgaggccgtgggcatggtggtgagccgcctgatccgcatccgc
tacggcaccgtggtgctgccgcgcggcctcaagcgcggcgtttgggtggagctgggtgag
gacgatgtgcgcatcatccgccgcctggccggtggcccgcagcaggcgcgcggcgagcgt
cagcagcaggcccgcgacgagcaggcccagcagcgtggcaagcgcaatcgtggcggcaag
gggccgcgccccagccgcccggatgcgccgccgcagccgcgtcaacaggccgccgagcgc
ggcccggaccgcgcccaggatcgcggtcgtgagcgctcgcgcgacagcgactacgaggac
gacgacttcatcccccacaacatcaacccgctggagcagaccttcgaccggcgctttgcc
tccagcggcaagcgcggcttcccggccggcttcggcgcgggtggcagtggtgcgcagggc
accggtgctccgggccgtggcggccagggcaaccgtggcaagggcggtggtggcggcaat
ggcccgcgtgagccagatcccatgcagacctcggtgggctacatcggtgccgacgccttc
acccgccgtggcggacgtggcggcggtggtggtggcggcaaccgcagcggtggtggcggt
ggcggcggcaaccggggcggcggtggtcgcggccggcgctaa
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