Shinella sp. XGS7: LHJ69_20755
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Entry
LHJ69_20755 CDS
T10581
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_20755
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_20755
Transporters [BR:
shin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LHJ69_20755
Antimicrobial resistance genes [BR:
shin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LHJ69_20755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UDF37809
LinkDB
All DBs
Position
complement(4521791..4524763)
Genome browser
AA seq
990 aa
AA seq
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MMVVQAFWPGATAQQVAEQVTDKIEKTLQEVPHADKVRSFTKPGESLTLFQLKDSTPPAE
VAGTWYLVRKKIGDMRATLPQGVIGPLFNDEFGDVYGSILALSADGFSREELREHADRVR
SRLLKVPDVAKVELFGVQAEKLFIEVSQKRLAELGLDFNQIIAQLSAQNAVEGAGVLNAG
AGNIQLRVGGQLNSVQALQELPIRAINPATGQASSLRLSDIAEVRRAYSDPPSVMVRHQG
KDVVALGISMAKGGDIIALGKSLQKAAGEIRQQLPAGIELSQIQDQPQAVARSVNEFVQV
LIEAVVIVLAVSFIALGLHTRPLRIDIWPGLVVAITIPLVLAITFVTMFYWSVGLHKISL
GSLIIALGLLVDDAIIAVEMMVRKLEEGYDKMHAATFAYDATAMPMLTGTLITAVGFLPI
GLAKSATGEYTFAIFAVTAAALLISWVVSVYFVPYLGALLLRTHPAKEGEAHELFDTPFY
NRFRAMVRWCVENRWKTIFATLLIFGLGLAGMGRVQQQFFPDSSRPEILVDLTLPEGSTI
EQSREIAKRFEARLMREPGVATVSTWIGSGVPRFYLPLDQIFPAPNVSQAIILPKDLKER
EALRKRLPALVAAEFPEARARVKLLPNGPPVPYPVQFRVAGDNVKEVRRWADQAKEILRA
NPNMRGVNDNWNESVKALRLEVDQDKARALGVSSQSIAQATRTLLSGTTVGQYREGDKLI
DIVLRQPLSEREAITDLGSAYVPTASGKSIPLTQIAKIDFVWEPGLLQREGRNYAVTVQG
DVAEGLQGATVSAQIWPELQALSKKMPPGYSIEVAGAVEESSKGQGSIAAGVPVMLFITF
TLLMLQLQSFSRAMLVFLTGPLGIAGVAAALLLLDRPFGFVALLGVIALMGMIQRNSVIL
IDQIEQDRSRGVPAWSAIVESAVRRFRPIVLTAAAAVLAMIPLSRSVFWGPMAVAIMGGL
IVATALTLLALPAMYAAWFRIERPTEASRF
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atcatggtggtccaggccttctggccgggcgccacggcccagcaggtggccgagcaggtg
accgacaagatcgagaagaccctgcaggaggtgccgcatgccgacaaggtgcgcagcttc
accaagccgggtgagtcgctgacactgttccagctcaaggacagcacgccgccggccgag
gtggccggcacctggtacctggtgcgcaagaagatcggcgatatgcgcgccaccctgccg
cagggcgtgatcgggccgctcttcaacgacgagttcggcgatgtctacggctccatcctg
gccctctcggccgacggcttcagccgcgaggagctgcgcgagcatgccgaccgcgtgcgc
tcgcgcctgctcaaggtgccggatgtggccaaggtggagctcttcggcgtgcaggccgag
aagctcttcatcgaggtctcgcagaagcgcctggccgagctgggcctggacttcaaccag
atcattgcccagctctccgcccagaacgcggtggagggggccggtgtgctgaatgccggt
gccggcaatatccagctgcgcgtgggcggtcagctcaactcggtgcaggcgctccaggag
ctgcccatccgcgccatcaatccggccaccggtcaggccagcagcctgcgcctgtcggac
attgccgaggtacgccgcgcctactcggacccgccctcggtgatggtgcgtcaccagggc
aaggatgtggtggccctgggcatctccatggccaagggcggggacatcatcgccctgggc
aagtccctgcagaaggcggccggcgagatccgccagcagctgcccgcgggcatcgagctc
tcgcagatccaggaccagccccaggcggtggcgcgctcggtcaacgagttcgttcaggtg
ctgatcgaggccgtggtgatcgtgctggcggtgagcttcatcgccctgggtctgcacacc
cggccgctgcgcatcgacatctggccgggtctggtggtggccatcaccattcccctggtg
ctggccatcaccttcgtcaccatgttctattggagcgtgggcctgcacaagatctcgctg
ggttcgctgatcattgccctgggcctgctggtggacgacgccatcattgctgtggagatg
atggtgcgcaagctggaggagggctacgacaagatgcatgcggccaccttcgcctatgac
gcgacggccatgcccatgctcaccggcaccctgatcacggccgtgggcttcctgcccatc
ggtctggccaagtcggccaccggcgagtacacctttgccatcttcgcggtcacggccgcg
gccctgctgatctcctgggtggtgtcggtgtatttcgtgccctatctcggggccctgctg
ctgcgtacccatccggccaaggagggcgaggcgcatgaactcttcgacacgcccttctac
aaccgcttccgcgccatggtgcgctggtgtgtggagaaccgctggaagaccatcttcgcc
accctgctgatcttcggcctgggtctggcgggcatgggccgggtgcagcagcagttcttc
ccggactccagccgtcccgagatcctggtggacctgaccttgcccgaaggctcgaccatc
gagcagagccgcgagattgccaagcgcttcgaggcgcgcctgatgcgcgagcctggcgtg
gccacggtcagcacctggatcggcagcggcgtgccgcgcttttacctgccgctggaccag
atcttcccggcgcccaatgtgagccaggccatcatcctgcccaaggacctgaaggaacgc
gaggccctgcgcaagcgcctgccggccctggtggccgccgagttccccgaggcgcgggcc
cgcgtcaagctgctgcccaacgggccgccggtgccttatccggtgcagttccgcgtggcc
ggcgacaacgtcaaggaagtgcgccgctgggccgatcaggccaaggagatcctgcgcgcc
aatcccaatatgcgcggcgtgaacgacaactggaacgagtcggtcaaggccctgcgcctg
gaagtggatcaggacaaggcgcgcgccctgggcgtgagcagccagagcatcgcccaggcc
acccgaaccctgctgtccggcaccacggtgggccagtaccgcgagggcgacaagctgatc
gacatcgtgctgcgccagcccctgtcggagcgcgaagccatcacggacctgggcagcgcc
tacgtgcccacggccagcggcaagagcatcccgctgacccagatcgccaagatcgacttc
gtctgggagccgggcctgctgcagcgcgagggccgcaactacgcggtcacggtgcagggg
gatgtggccgagggcctgcagggcgccaccgtcagcgcccagatctggcccgagctgcag
gccctgagcaagaagatgccgccgggctacagcatcgaggtggccggcgccgtggaggag
agcagcaagggccagggctcgatcgcggccggcgtgccggtgatgctcttcatcaccttc
accctgctgatgctgcagctgcagagcttctcgcgcgccatgctggtcttcctgaccggg
cccctgggcattgccggcgtggccgcagccctgctgctgctggaccgcccctttggcttc
gtggccctgctgggtgtgatcgccctgatgggcatgatccagcgcaactcggtgatcctg
atcgaccagatcgagcaggaccgctcgcgcggcgtgccggcctggagcgccatcgtggag
tcggcggtgcggcgcttccgccccatcgtgctgaccgcggcggcggccgtgctggccatg
atcccgctctcgcgttcggtgttctgggggccgatggcggtggccatcatgggcggcctg
atcgtggccacggccctgaccctgctggccctgccggccatgtatgcggcctggttccgc
atcgagcgccccaccgaagcctcgcgcttctga
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