Shinella sp. XGS7: LHJ69_20895
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Entry
LHJ69_20895 CDS
T10581
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
shin Shinella sp. XGS7
Pathway
shin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LHJ69_20895 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shin01007
]
LHJ69_20895 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shin03016
]
LHJ69_20895 (pheT)
Enzymes [BR:
shin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LHJ69_20895 (pheT)
Amino acid related enzymes [BR:
shin01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LHJ69_20895 (pheT)
Transfer RNA biogenesis [BR:
shin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LHJ69_20895 (pheT)
Prokaryotic type
LHJ69_20895 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
UDF34983
LinkDB
All DBs
Position
complement(4550934..4553348)
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AA seq
804 aa
AA seq
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MQFPESWLRSFCNPALNTQELAELLTMSGLEVEELRPAAPAFHGIVVAEILTAEQHPNAD
KLRVCTVNAGGPEPLQIVCGAPNARAGIKVPLATIGAELPPGEDGQPFKIGKGKLRGVES
FGMLCSARELKLSEDHGGLLELAADAPVGQNIREHLNLDDMLFTLKLTPNLAHCLSVYGI
AREVSALTGTPLQASSFPPVAVQHEAKLPVRIEAPDLCGRFSGRVVRGVNTRAQTPAWMV
ERLARCGQRSVSPLVDISNYVMFELGRPSHIFDLDKIHGELIVRWGKAGEQLKLLNGNTI
TVDEQVGVIADREQVESLAGIMGGDATAVSDDTKNVYVEAAFWWPKAVAGRSRRYNFSTD
AGHRFERGVDPVGTVEHIERITQLILEICGGEAGPMDDQVAAMPERQPVTLRVARAAKVI
GMDLSQAQCAEVFKRLGLDFVEGEGTLTVTPPSYRFDLQIEEDLIEEVIRVLGYPKLPAT
PPLAPVVGKVLSESRRAVHALRHAMAGRDYYETINFSFVEARWEQELAGNANPIQLLNPI
AAPLAVMRSSLIGSLVQVLRHNLARKAPRVRVFEIGRVFLRDASVVESDSSIAGVAQPMR
LAGLAYGPAEQQQWSQRDRQVDFFDVKGDLEALFAPRQLTFVAAEHPALHPGRSAKVLLE
GAEIGVIGELHPKWRQGYELPQAPVLFELALDAVLARSLPKSAGVPRQQSVQRDIAVIVG
EGVTHDALMAVIAGAHEGLIRSAKLFDVFKPAQPTAELKAGERSLAVRLELLDEENTLTD
ERIEQAVSKVLAALAEKLGARLRG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccccgagtcctggctgcggagcttctgcaaccccgcgctgaatacccaagag
ctggccgagctgctgaccatgtctggcctggaagtcgaagagctgcgccccgcggcaccg
gccttccacggcatcgtcgtggccgagatcctgacggccgagcagcaccccaatgccgac
aagctgcgcgtctgcacggtcaacgccggtggccccgagcccctgcagatcgtctgcggc
gcccccaacgcccgcgccggcatcaaggtgcccctggccaccatcggcgccgaactgccc
ccgggtgaggacggccagcccttcaagatcggcaagggcaagctgcgcggcgtggagagc
ttcggcatgctgtgctcggcccgcgagctcaagctcagcgaggaccatggcggtctgctg
gagctggcagccgacgcgccggtgggccagaacatccgtgagcacctgaacctggacgac
atgctgttcacgctcaagctcacgcccaatctggcgcattgcctgagcgtctacggcatt
gcccgcgaggtctcggccctgaccggcacgccgctccaggcgtccagcttcccgcccgtg
gcggtccagcatgaggccaagctgccggtgcgcatcgaggcgcccgacctgtgcggtcgc
ttctcgggccgcgtggtgcgcggcgtcaacacccgggcccagacccctgcctggatggtg
gagcgcctggcgcgttgcggccagcgctcggtctcgcccctggtggacatctccaactat
gtgatgttcgagctgggccgtcccagccacatcttcgatctggacaagatccacggcgag
ctgatcgtgcgctggggcaaggccggcgagcagctcaagcttctgaacggcaacaccatc
acggtggacgagcaggtgggcgtgatcgccgaccgcgagcaggtcgagtctctggccggc
atcatgggcggcgacgccacggccgtgtccgatgacaccaagaacgtctacgtggaagcc
gccttctggtggcccaaggccgtggccggccgttcgcgccgctacaacttctccaccgat
gccggtcaccgcttcgagcgcggcgtggacccggtgggcacggtcgagcacattgagcgc
atcacccagctgatcctggagatctgcggcggcgaagccgggcccatggacgaccaggtg
gccgccatgcccgagcgccagcccgtgaccctgcgcgtggcccgcgccgccaaggtgatc
ggcatggacctgagccaggcgcaatgcgccgaggtcttcaagcgcctgggtctggacttt
gtggaaggcgagggcacgctgactgtgaccccgcccagctaccgcttcgacctccagatc
gaggaagacctgatcgaggaagtgatccgcgtgctgggctaccccaagctgccggccacg
ccgcccctggcgccggtggtgggcaaggtgctgagcgaatcgcgccgcgcggtgcacgcg
ctgcgccacgccatggccgggcgcgactattacgagaccatcaacttcagctttgtggaa
gcgcgctgggagcaggagctggccggcaacgccaaccccatccagctgctcaaccccatt
gccgcgccgctggccgtcatgcgctccagcctgatcggcagcctggtgcaggtgctgcgt
cacaacctggcgcgcaaggcgccgcgcgtgcgcgtgttcgagatcggccgcgtcttcctg
cgcgacgcttcggtcgtggagagcgacagcagcatcgccggcgtggcccagcccatgcgc
ctggccggcctggcctatggcccggccgagcagcagcaatggagccagcgcgaccgtcag
gtggacttcttcgatgtgaagggcgatctggaagccctgttcgcgccgcgccagctgacg
ttcgtggccgccgagcatccggccctgcaccccggccgctcggccaaggtgctgctggag
ggcgccgagatcggcgtgatcggcgagctgcaccccaagtggcgccagggctatgagctg
ccccaggctccggtgctgttcgagttggctctggatgccgtgctggcgcgcagcctgccc
aagagtgccggtgtgccgcgccagcagtcggtgcagcgcgatatcgcggtgatcgtgggc
gagggcgtcacgcatgacgcgttgatggccgtcatcgccggcgcccatgagggcctgatc
cgctcggccaagctcttcgacgtgttcaagcccgcccagcccacggccgagctcaaggcc
ggcgagcgcagcctggccgtgcgcctggagctgctggacgaggagaacaccctgaccgat
gagcgcatcgagcaggcggtctccaaggtgctggcggctttggccgagaagctgggcgcc
cgtctgcgcggctga
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