Shinella sp. XGS7: LHJ69_21040
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Entry
LHJ69_21040 CDS
T10581
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
shin Shinella sp. XGS7
Pathway
shin00362
Benzoate degradation
shin01100
Metabolic pathways
shin01120
Microbial metabolism in diverse environments
shin01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LHJ69_21040 (pcaB)
Enzymes [BR:
shin01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
LHJ69_21040 (pcaB)
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Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
UDF35007
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All DBs
Position
complement(4583546..4584943)
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AA seq
465 aa
AA seq
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MLVSEAFLSTPEMQALLDERAMIQAMMDFEAALARGQARLGVIPQAAAQAIASLCRAELY
DVGALVAASGRAGSLAIPLVRKLSETVALFDPAAAGYVHWGSTSQDVIDTALVLQTRRAL
CLIEEDLLALLGHLLDLAERHAAVPVLARTLMQPALVSSLRARLYHWSAPLLRSAQALRA
QAEQALLLQLGGAAGTLASLGEQGPAVAAAVAAELRLKLPETAWHTQRDRWLRLGAELGV
LTGSLGKLARDWALLAQAEVGELSEAGAGGSSAMPHKRNPVACMQALAAARRAPQRVAAL
LACMDQEQERGLGGWQAEQAEWCGLLLSSHAAVRALSQAAAGLQLDLGRMRANIDQQQDL
VFAEALALLLARVWGKAGGHRAVELLAQQVQARGRPLRELARQLPTEHAELRARIAPEEI
EALFDLEAAARQADAGVAAGLARLRAEWTEMMDQPCKHHESPRSA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgttggtcagcgaggcttttctttccacgcccgagatgcaggccctgctcgatgagcgg
gccatgatccaggccatgatggacttcgaggcggcgctggcgcgcggtcaggcgcgcctg
ggtgtgattccccaggcagcggcccaggcgattgccagcctgtgccgcgccgaactctac
gatgtgggcgccctggtggccgccagcggccgggccggcagcctggccattcccctggtg
cgcaagctcagcgagacggtggcgctcttcgatcccgcggccgccggctatgtgcattgg
ggcagcaccagccaggacgtgatcgacaccgccctggtgctgcagacccgacgcgccctg
tgcctgatcgaggaggacctgctggccctgctgggccatctgctggacctggccgagcgt
cacgccgccgtgcccgtgctggcccgcaccctgatgcagcccgccctggtgagcagcctg
cgtgcgcgcctgtaccactggagcgcgcccctgctgcgctcggcccaggccctgcgcgcc
caggccgagcaggccttgctgctgcagctgggcggcgcggccggcaccctggcctcgctg
ggcgagcaggggccggcggtggccgccgcggtggccgccgagctgcgtctgaaactgccc
gagaccgcctggcacacccagcgcgaccgctggctgcgcctgggcgcggagctgggcgtg
ctcaccggctcgctgggcaagctggcgcgcgactgggccctgctggcccaggccgaggtg
ggcgagctcagcgaggcgggggccggcggctccagcgccatgccgcacaagcgcaatccg
gtggcctgcatgcaggccctggcggcggcgcgccgcgcgccccagcgcgtggcggccctg
ctggcctgcatggaccaggagcaggagcgcggcctgggcggctggcaggccgagcaggcc
gagtggtgcggcctgctgctgagcagccatgcggcggtgcgcgcgctcagccaggccgcg
gccggcctgcagctggatctggggcgcatgcgcgccaatatcgatcagcagcaggatctg
gtcttcgccgaggccctggccctgctgctggcccgggtctggggcaaggccggcgggcat
cgcgccgtggagctgctggcccagcaggtgcaggcccgcggacgccccttgcgcgagctg
gcccgccagctgccgaccgaacacgccgagctgcgtgcacgcatcgcccccgaggagatc
gaggcgctcttcgatctggaggccgcggcccgccaggccgatgccggcgtggccgcgggc
ctggcccgcctgcgcgccgagtggaccgagatgatggaccagccctgcaagcaccatgaa
tccccccgatcagcctga
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