Shinella sp. XGS7: LHJ69_21150
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Entry
LHJ69_21150 CDS
T10581
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_21150
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_21150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
UDF35028
LinkDB
All DBs
Position
4610318..4614502
Genome browser
AA seq
1394 aa
AA seq
DB search
MNDKNSPATPDSEPVRPTPPRRRARWLLAGTLALPVLASVAGLGAYWALGSAGGSAWLLR
QVPGLVVEAPEGALLGDFSARRLAWRSESFSLELQGLAWQGLSLSWDRSPALWGRLRIQS
LSAQRLLLDWKADPDAPPTPAPQDLALPLALDLPTLSLGEISAPGLGSTPLRELRAGLWL
GEDGGARHRLALQGLRWERLNLEGEARIASAGPLPLQAALRLSQQAATESAADLQPPAWR
AQLQLDGPLAAPQLRAEAQVQVEGQTGQRLALQAGLRPFAPWPLAGAEIKTQNFDLQALS
DQLPATALSGSARLDSPAWDQPALLQAELSNARAGRWDQRRLPLQQLKLDLALRPDRLGD
LLSDPQGLAALQLRRLEARLGSAAEPGGELTASGTGVQLQARLRELRSAALDARLPRLTL
GGSLALEGQPGAPGLPLRLQSRLEGQFMPEGAPARPLSLVLQARHADRVLALEDAQLQSG
HSQLKLQGRLQSAGSGAWSARFQAAAKDFDPRLLWAGPPRSAWAQGQHSLEASASGELTG
GAAGGKTWPQGRAELKLGPSLLAGIGLEGTLNYQAEARGNPTLRGELRAGENRLQLRADD
LGGKAPQAQLSLDAPRLAPLAPLLALAGGQPQLAGSLQAQADFTEQAGAWRSSGSLKAQG
LQLRGLPALGQQAFALAESQLGWSLDSRAEAPLRAEGQIDRLSLGSTQLSSARLDLQGSW
ARHRLQLQAQGQLPAPSWAAGLVDGSTLGGQFSTELSGQFSDSPWQALAQARKPLDWRAQ
LGSLLLRPQPQRRNQPDWLKLQDLALSLSLGGDGLPIAAQAQPGRLELAGATLSWSQLQW
QAPRQAGQNPLLALDLNLEPLKVAPLLARWQPDFGWGGELVVGGQVKVRSSPQVEIDIGL
NRAGGDLTVTEGSLTQQLGLSDLHISLQARDGVWHFAQGLAGSNLGVLAGAASSRTSPQA
LWPEPQAPLEGVLQLDVANLSTWGAWVPAGWRLGGTFNAALRLAGKVGAPELLGSARAAQ
LQLRNPLLGVDAREGELALDLQGPSATLQRFSVRGGEGTLSAQGRAELGAKPQLDLSFKA
EKFAFLSRVDRRVVASGQAALLAGDRSLSLKGQVAVDEGLFDFSRGNAPSLDSDVQVLRR
PDPQAQATAAAKRSNPNPPKIDVQVGIDLGRDLRLRGRGVDTRLRGELRLIHQGAGPLLT
GTVRTFGGTYDAYGQKLEIEKGEVSFAGAIDNPRLDVRAVRPNTDQVVVGVTVTGTALDP
RIKLFSEPDKSDTEKLSWLLLGRAPDNLGRTDTALLQRAALALLSGEGESPSGKLMKNLG
LDEFSLGQDDTDARSTVVRLGKQLSRRWYVGYERSLNATAGSWQLIYRMAQRFTLRAQAG
QDNALDLIWQWKWD
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacaagaattcccccgccaccccggacagcgagccggtgcgccccaccccgccc
cgccgccgcgcccgctggctgctggccggcaccctggccctgcccgtgctggccagcgtg
gccggcctgggcgcctactgggccctgggcagcgccggcggcagcgcctggctgctgcgc
caggtgccgggcctggtggtggaagcgcccgaaggcgccctgctgggcgacttctcggcg
cgccgcctggcctggcgcagcgagagcttcagcctggagctgcagggcctggcctggcag
ggtctgagcctgagctgggaccgcagccccgcgctctggggccggctgcgcatccagagc
ctgagcgcccagcgcctgctgctggactggaaggccgaccctgacgccccgcccacgccg
gccccgcaagacctggccctgcccctggcgctggacctgcccacgctgagcctgggtgag
atcagcgcgcccggcctgggcagcacgccgctgcgcgagctgcgcgccggcctgtggctg
ggcgaggacggcggcgcccgtcaccgcctggccctgcagggtctgcgctgggaacgcctg
aatctggaaggcgaggcccgcatcgccagcgccggccccctgcccctgcaggccgcgctg
cgtctgagccagcaggcggccaccgaatccgccgccgatctgcagcctcccgcctggcga
gcccagctgcagctggacggccccctggccgcgccccagctccgggccgaggcccaggtg
caggtggaaggccagaccggccagcgcctggcgctgcaggccggcctgcgcccctttgcc
ccctggcccctggccggggccgagatcaagacccagaacttcgatctgcaggccctctcg
gaccagctgcccgccaccgccctcagcggcagcgcccgcctggacagccccgcctgggac
cagcccgccctgctgcaggccgagctgagcaatgcccgcgccggccgctgggaccagcgg
cgcctgcccctgcagcagctcaagctggacctggccctgcgccccgaccgcctgggcgat
ctgctcagcgatccgcagggcctggccgccctgcagctgcgccgcctggaggcccgcctg
ggcagcgccgccgaacctggcggcgagctcacagcctcgggcacgggcgtgcagttgcag
gcccggctgcgcgagctgcgcagtgcggccctggatgcacgactgccccgcctgaccctg
ggcggcagcctggccctggagggccagcccggcgccccgggcctgccgctgcggctgcag
agccggctggagggccagttcatgcccgagggcgccccggcacgcccgctcagcctggtg
ctgcaggcccgccacgccgaccgggtgctggcgctggaagacgcccagctgcagtccggc
cactcccagctcaagctgcagggccggctgcagtcggccggcagcggcgcctggagcgcc
cgcttccaggccgccgccaaggattttgatccgcgcctgctctgggccggcccgccgcgc
tcggcctgggcccagggccagcacagcctggaagccagcgccagcggcgagctgacgggc
ggcgcggccggcggcaagacctggccccagggccgggccgagctcaagctgggccccagc
ctgctggccggcatcggcctggaaggcacgctgaactaccaggccgaggcccgcggcaac
cccaccctgcgtggcgagctgcgtgccggcgagaaccgcctgcagctgcgcgccgacgac
ctgggtggcaaggccccgcaggcgcagctcagcctggatgcaccgcgcctggccccgctg
gcgcccctgctggccctggccggcggccagccccagctggccggcagcctgcaggcccag
gccgatttcaccgagcaggctggcgcctggcgcagcagcggcagcctcaaggcccagggc
ctgcagctgcgcggcctgccggccctgggccagcaggcctttgccctggccgagagccag
ctcggctggagcctggacagccgcgccgaagccccgctgcgcgccgagggacagattgat
cgcctgagcctgggcagcacccagctgagcagcgcccgcctcgatctgcagggcagctgg
gcccgccatcgcctgcagctgcaggcccagggtcagctgccggctccgagctgggcggcc
ggtctggtggacggcagcaccctgggcgggcagttcagcaccgaactcagtggccagttc
agcgactcgccctggcaggccctggctcaggcgcgcaagcccctggactggcgcgcccag
ctgggcagtctgctgctgcggccccagccccagcgccgcaaccagcccgactggctcaag
ctgcaagacctggccctgagcctgagcctggggggcgacggcctgccgatcgcggcccag
gcccagcccggccgcctggagctggccggcgccaccctcagctggagccagctgcagtgg
caggcaccgcgccaggccggccagaacccgctgctggccctggacctgaatctggagccc
ctcaaggtggcgcccctgctggcacgctggcagcccgacttcggctggggcggcgaactg
gtggtgggcggccaggtgaaggtgcgcagcagcccgcaggtggagatcgacatcggcctg
aaccgcgcgggcggcgacctgacggtgaccgagggcagcctcacccagcagctgggcctg
agcgacttgcacatcagtctgcaggcacgcgatggggtctggcactttgcccagggcctg
gccggcagcaatctgggcgtgctggccggcgcagccagcagccgcacctcgccccaggcc
ctgtggcccgagccccaggcgccgctggagggggtgctgcagctggacgtggccaatctc
agcacctggggcgcctgggtgccggcgggctggcgcctgggcggcaccttcaatgccgcc
ctgcgcctggccggcaaggtgggcgcgcccgagctgctgggcagcgcccgcgccgcccag
ctgcagctgcgcaaccccctgctgggcgtggacgcccgcgagggcgagctggcgctggac
ctgcaagggcccagcgccacgctgcagcgcttcagcgtgcgcggcggcgagggcacgctc
agcgcccagggccgggccgagctgggcgccaagccgcagctggacctgagcttcaaggcc
gagaagttcgccttcctgagtcgggtggaccggcgcgtggtggccagcggccaggccgcc
ctgctggcaggcgatcgcagcctcagcctcaagggccaggtggcggtggacgaaggcctg
ttcgacttctcgcgcggcaatgcgcccagcctggacagcgatgtgcaggtgctgcgccgc
cccgatcctcaggcccaggcgacggccgcggccaagcgcagcaaccccaatccgcccaag
atcgatgtgcaggtgggcatagacctgggccgcgacctgcgcctgcgcggccgcggcgtg
gacacgcggctgcgcggcgagctgcgcctgatccaccagggcgccggccccctgctcacc
ggcactgtgcgcacctttggcggcacctatgacgcctatggccagaagctggagatcgag
aagggcgaggtcagctttgccggcgccatcgacaacccgcgcctggacgtgcgcgcggtg
cgccccaacaccgaccaggtggtggtgggcgtgaccgtcaccggcacggccctggacccg
cgcatcaaactcttctccgagcccgacaagagtgacaccgagaagctttcctggctgctg
ctgggtcgcgcgcccgacaacctgggccgcaccgacaccgccctgctgcagcgcgccgcc
ctggccctgctcagcggcgagggcgaaagcccctcgggcaagctgatgaagaacctgggg
ctggacgagttctccctgggtcaggacgacaccgacgcccgcagcaccgtggtgcgcctg
ggcaagcagctttcacgccgctggtatgtgggctacgagcgcagcctcaacgccaccgcc
ggcagctggcagctcatctaccgcatggcccagcgcttcaccctgcgcgcccaggccggg
caggacaacgccctggacctgatctggcagtggaagtgggattga
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