Shinella sp. XGS7: LHJ69_22695
Help
Entry
LHJ69_22695 CDS
T10581
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
shin Shinella sp. XGS7
Pathway
shin00470
D-Amino acid metabolism
shin00550
Peptidoglycan biosynthesis
shin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LHJ69_22695 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LHJ69_22695 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shin01011
]
LHJ69_22695 (murD)
Enzymes [BR:
shin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LHJ69_22695 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
shin01011
]
Precursor biosynthesis
Amino acid ligase
LHJ69_22695 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Trypan_PARP
DUF6798
Motif
Other DBs
NCBI-ProteinID:
UDF37815
LinkDB
All DBs
Position
complement(4950318..4952036)
Genome browser
AA seq
572 aa
AA seq
DB search
MAAWVTRHGGRVRVWDSRENPPQRSALRERLPEAEFLHGDLPDAALSGVQLLLKSPGLSP
LDARLQPLLTLARNTGVPVQGELDLFARALADLKAERGYAPAVLAITGTNGKTTTTSMTA
QLVERAGKRVAVAGNIGPTLLDTLAAALDLEPAPQPVSEAEPVADVAEPLIEAETEAPAE
SQPETEPEAEPEAEPEPAAEPAPSTTLEEVAALLDEQPLPIKPPPPKPPVFEHLPEVWVL
ELSSFQLDGVTGFEPTAAAVLNLSQDHLDWHGDMAAYGRAKARIFGEQAVMVINRDDALV
EAMVPAPIKVAQGRGRPHKLVARQVLRFGLDAPRGPGDYGLVEEGGMAWLVRAREADETQ
LPRRRKGDAEELELSIQRLMPADALRVRGRHNAANALAALALASAAGCPLAPMLHGLREY
RGEPHRVEHVAMVRGVDFYDDSKGTNVGATVAAIDGLGADRAPAKLVLILGGDGKGQDFS
PLREPLARHARAVALIGRDAPAIASVLPEGLRAQTHETLQAATRWALEQAHSGDSVLLSP
ACASLDMFRNYAHRAEVFVAEVQALADEGGLA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgggtgacgcgccacggcggccgggtgcgcgtctgggattcgcgcgagaac
ccgccgcagcgctcagccctgcgtgagcgtctgcccgaggccgagttcctgcatggcgac
ttgccggatgcagccctctcgggcgtgcagctgctgctcaagagcccgggcctctcaccg
ctggacgcgcgcctgcagcccctgctgacgctggcccgcaacaccggcgtgccggtgcag
ggcgaactggacctcttcgcccgtgccctggccgatctgaaggccgagcgcggctacgcg
cccgcggtgctggccatcaccggcaccaatggcaagaccaccaccacctcgatgacggcc
cagctggtggagcgcgccggcaagcgtgtggccgtggccggcaacatcggcccgaccctg
ctggacaccctggctgccgccctggatctggagccggcgccgcagccggtgtccgaggcc
gagccggtggcggatgtcgccgagccgctgatcgaggccgagactgaagcgccggccgag
tcgcagcctgaaacagagcctgaagcagaaccggaagcggagcccgagccggccgccgaa
ccggcccccagcaccacgctggaagaggtggcggccctgctggacgagcagcccctgccc
atcaagccgccgccgcccaagccgccggtcttcgagcatctgcccgaggtctgggtgctg
gagctctcgagcttccagctggacggtgtgacgggcttcgagcccacggccgccgcggtg
ctgaacctgagccaggaccatctggactggcatggcgatatggccgcctacggccgcgcc
aaggcgcgcatcttcggcgagcaggccgtgatggtgatcaaccgtgacgatgccctggtc
gaggccatggtgccggcgcccatcaaggtggcccaggggcgcggccggccacacaagctg
gtggcgcgtcaggtcctgcgcttcggcctggatgcgccgcgcggcccgggcgactacggc
ctggtggaggagggcggcatggcctggctggtgcgcgcccgcgaggccgacgagacccag
ctgccgcgccgccgcaagggcgatgccgaggagctggagctgtccatccagcgcctgatg
ccggccgacgccctgcgcgtgcgcggccgccacaacgccgccaatgccctggccgccctg
gccctggccagcgccgcgggctgcccgctggcccccatgctgcacggcctgcgcgagtac
cgcggcgagccgcaccgcgtggagcatgtggccatggtgcgcggcgtggacttctacgac
gattccaagggcaccaatgtgggcgccaccgtggccgccatcgacggcctgggcgccgac
cgcgcgcccgccaagctggtgctgattctggggggcgacggcaagggccaggacttctcg
cccctgcgcgaaccgctggcccgccatgcccgcgccgtggccctgatcggccgcgacgcg
ccggccatcgccagcgtgctgcccgagggcctgcgcgcccagacgcatgagaccctgcag
gccgccacgcgctgggcgctggagcaggcccatagcggcgacagcgtgctgctgagcccg
gcctgcgccagcctggacatgttccgcaactacgcccaccgcgccgaggtcttcgtggcc
gaggtgcaggccctggccgacgaaggagggctggcctga
DBGET
integrated database retrieval system
