Shinella sp. XGS7: LHJ69_23040
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Entry
LHJ69_23040 CDS
T10581
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
shin Shinella sp. XGS7
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_23040
Transporters [BR:
shin02000
]
Other transporters
Pores ion channels [TC:
1
]
LHJ69_23040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UDF35390
LinkDB
All DBs
Position
5017642..5020647
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AA seq
1001 aa
AA seq
DB search
MSAAASPAVPRLRPHALGLALQAALLLSLPLGTQAQVPTERQAAGSAPAAPGATRRYDIP
PGPLAEVLSRFGAHSGLLISVDARLTAQRQSPGLRGDYGQEQALHALLAGTGLQAQRTPQ
GVLTLVPASTAPNPAPGTLALAPLRVQGEAAQGGLALHASAADAAAAVYREARSTAFIDR
ETLERFRGTSPGEMLKGVPGVQMGDLRNGHALDVNIRGLQGQGQGRVAVVVDGSQQSLDV
YRGYAGQQQRSYLDPDLIGAVSIEKGPSLSLDGAGAIAGVVSMRTLLPEDILAPGAASGW
RLRGGLADNSAGEQSGFLTLNRSERNSLLDARSGFASAAYASRGERLDWLAAVVERRQGN
YFAGRHGAERYEGSQRGSGGTGMNPDPVYEYYRPGEEVLNTHSRSHSLLLKSTWRPNEDQ
ALELGLRRLNARYGEIMPSAISRTPASSEWVTYANPEGTMQQFEPGRMKLTALTAEHRWQ
PAGQSLLDLRSKLWFTRADSLMFNAVMGNAPVGRDLPSNQMGDPQGESYQHALRSEVRGQ
RWGAQLGNSSLFFFAGGQSLKAQYGLSYTHEKTGPGPGTPVVEADLHNNRYVRSGLRKET
SLSASLDWKPTEAWSLLAGGRLIHYALQDRNRRAHVTQTQEVPRRAVHVYRNGKALEYVT
WYPDAQGQFTEASLRASPHRLGTLADLGFDSWQAFAPDNGAFMDEIPVAWRYDEPLRRQG
TRFAPTLSASFKPDADSLLYMRYAEGFKLPSMFESTVGNNFITPNPELRPERNRSLELGA
ATTRHEVWRAGDRLSLKLARFENRVKDYITRSYDPASYRFSMANMDRFETAGWEFQSAYQ
GGPFFGEFSATYFTRARTCDAATAAALRQAKYGVKNAPDCADGGFGGSYANTQNPPKFSI
NTTLGLRLPEHGLTLGARLVRNSAPLSRLDQPWQTNAYTTLQQYYPATRTLDLFASLRLP
RGAELNLALDNVGDRYYLDPLALSPMPAPGRTLRAELGLRF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctgcatctcccgctgttcctcgtcttcgtccccatgccctgggcctggcc
ctgcaggccgccctgctgctgagcctgccgctgggcacccaggcccaggtgcccaccgag
cgccaggccgccggcagcgcgccggccgcccccggcgccacgcggcgctacgacatcccg
cccggccccctggccgaggtgctgagccgcttcggcgcccacagcggcctgctgatctcg
gtggacgcgcgcctcaccgcccagcgccagagccccggcctgcgcggcgactacgggcag
gagcaggccctgcacgccctgctggccggcaccggcctgcaggcccagcgcacgccccag
ggcgtgctcactctggtgcccgcctccaccgcgcccaacccggccccgggcaccctggcc
ctggccccgctgcgcgtgcagggcgaagcggcgcagggcggtctggccctgcacgccagc
gcggccgacgcggccgcggccgtctaccgcgaagcccgttccaccgccttcatcgaccgc
gagaccctggagcgctttcgcggcacctcgcccggcgagatgctcaagggcgtgcccggc
gtgcagatgggcgacctgcgcaacggccatgcgctggacgtgaacatccgcggcctgcag
ggccagggccagggccgggtggccgtggtggtggacggcagccagcagtcgctggatgtg
taccgcggctatgccggccagcagcagcgcagctatctggaccccgacctgatcggcgcg
gtgagcatcgagaaaggccccagcctgagcctggacggcgcgggcgcgattgccggcgtg
gtgagcatgcgcaccctgctgcccgaagacatcctggccccgggcgcggccagcggctgg
cgcctgcgcggcggcctggccgacaacagcgccggcgagcagtcgggctttctcaccctg
aaccgcagcgagcgcaacagcctgctcgacgcgcgcagcggctttgcctcggccgcctac
gccagccgcggggagcgcctggactggctggccgccgtggtggagcgccgccagggcaat
tacttcgccggccggcatggcgccgagcgctacgagggcagccagcgcggcagcggcggc
acgggcatgaaccccgatccggtctatgagtactaccgtcccggcgaggaggtgctcaac
acccacagccgcagccactccctgctgctcaagagcacctggcgcccgaacgaggaccag
gccctggagctgggcctgcgccgcctcaatgcgcgctatggcgagatcatgccctcggcc
atctcgcgcacgccggcctccagcgaatgggtcacctatgccaaccccgagggcaccatg
cagcagttcgagccgggccgcatgaagctcaccgccctcaccgccgagcaccgctggcag
cccgcgggccagtccctgctggacctgcgcagcaagctctggttcacccgcgccgacagc
ctgatgttcaacgccgtgatgggcaatgcaccggtgggccgcgacctgcccagcaaccag
atgggcgacccgcagggcgagagctaccagcatgcgctgcgctccgaggtgcgcggccag
cgctggggcgcgcagctgggcaacagctcgctgttcttcttcgcgggcggccagtcgctc
aaggcgcaatacggcctgagctacacgcatgagaaaaccggccccggcccgggcacgccg
gtggtggaggccgatctgcacaacaaccgctatgtgcgctccggcctgcgcaaggagacc
agcctcagcgcctcgctggactggaagcccaccgaggcctggagcctgctggccggcggt
cgtctgatccattacgcgctgcaggaccgcaaccgccgggcccacgtcacccagacccag
gaggtgccgcgccgcgccgtgcatgtctaccgcaacggaaaagccctggaatacgtgacc
tggtaccccgacgcccagggccagttcaccgaggcctcgctgcgcgccagcccgcaccgc
ctgggcaccctggccgatctgggctttgacagctggcaggccttcgcgcccgacaacggc
gccttcatggacgagatccccgtggcctggcgctacgacgagccgctgcgccgccagggc
acgcgcttcgcgcccacgctcagcgccagcttcaagcccgatgccgacagcctgctctac
atgcgctacgccgagggcttcaagctgcccagcatgttcgagagcacggtgggcaataac
ttcatcacgcccaaccccgagctccggcccgagcgcaaccgcagcctggagctgggcgcc
gccaccacgcggcacgaggtctggcgcgccggtgaccggctctcgctcaagctggcccgc
ttcgagaaccgggtgaaggactacatcacccgcagctacgaccccgccagctatcgcttc
agcatggccaatatggaccgcttcgagacggcgggctgggagttccagtcggcctaccag
ggcgggcccttcttcggcgagttctcggccacctacttcacccgcgcccgcacctgcgac
gccgccaccgccgccgcgctgcgccaggccaagtacggcgtgaagaacgcacccgactgc
gccgacggcggcttcggcggctcctatgccaacacgcagaacccgcccaagttcagcatc
aacaccaccctgggcctgcgcctgcccgagcacggcctgaccctgggcgcccgcctggtg
cgcaatagcgcgccgctctcgcgcctggaccagccctggcagacgaatgcctacaccacg
ctgcagcagtactaccccgccacccgcaccctggacctcttcgccagcctgcgcctgccg
cgcggtgccgagctgaacctggccctggacaacgtgggcgaccgctactacctcgacccc
ctggccctctcgcccatgcccgcccccggccgcaccctgcgcgccgagctgggcctgcgc
ttctga
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