KEGG   Salvia hispanica (chia): 125185142
Entry
125185142         CDS       T09851                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
shis  Salvia hispanica (chia)
Pathway
shis03013  Nucleocytoplasmic transport
shis03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125185142
   03015 mRNA surveillance pathway
    125185142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125185142
   03041 Spliceosome [BR:shis03041]
    125185142
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     125185142
Spliceosome [BR:shis03041]
 Complex C
  Other components
   EJC/TREX
    125185142
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 125185142
NCBI-ProteinID: XP_047937591
LinkDB
Position
4:1008523..1012170
AA seq 422 aa
MAGTVVAEKTEAELRKEIDELRRQQREITERLRDPRGIRRGGLTSAGPRNFAANGSRRRG
IVRPAERNDADDQPPAKRRLSSAVVKVEEGEIIEEGSEIATAVEEKEVAFDAGEAVNTNG
SQGESKQSNWSKRDGDQRVTKMDFDIPPAEHVPRVLPKDEDPSLVSRNKRMLGQLLGTLE
RFRKEDVQRSGTEAYMRRSDSLKRAEQRAREESEKLRLQEREQIAEKRKRDLILRARIAA
KAQEKNMELLFLRWSEHHKKLGNFIRTKAEPPIYYSFSKPLDQDATSTEQQKEKMFQEWK
SARREELSQYQKQILEQHLGNVDKELERWQNGRKGRRPNNTVANLQETMDKELETHQLEH
GPKTRIIPGQSNNEDEDDVEDINVAEDDMMDDVLGVDDNGRRADETEKLETGNSPPVEKK
EE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcaggcacggtggtggccgagaagacagaggcggagcttcggaaagagatcgacgaa
ctccgccgccaacagcgggagatcacggagcggctacgagatcccaggggcattcgccgc
ggtggattaacgagcgccggaccgcgcaatttcgccgccaatggcagccgtcggcgtggc
attgttcggcctgcggagaggaatgatgctgacgaccagcctccagcaaaaaggcgactc
tcttcagctgttgtgaaggtcgaggagggggagataatcgaggaaggttctgaaattgcg
acggcggtggaagagaaagaagtagcatttgatgcaggagaggctgtaaataccaatgga
agccagggtgagagtaagcagtctaattggtctaagagggatggtgatcagcgggtgact
aaaatggactttgatatccctcctgctgagcacgtgccgagggtgttgcctaaggatgag
gaccctagtctggtgagtaggaataaaaggatgcttggccagcttcttggcacgttagag
aggttcaggaaagaggacgtgcaacgatcaggcacggaggcatacatgaggagatctgat
tctctgaaaagggctgagcaacgtgcacgtgaagagagtgaaaaactgaggctacaagaa
cgtgaacagattgcagaaaaacggaaaagagatttgattctaagagcacgaatagctgca
aaagcacaggaaaagaacatggaattgctgtttcttcggtggagtgagcaccacaaaaaa
cttggaaatttcataaggactaaggctgaacctccgatctattactcgttttccaaacct
ctggatcaagatgcaacttcaactgagcagcagaaggaaaagatgtttcaagagtggaaa
tctgctaggagagaggaactgtcgcaatatcagaaacagattttggagcagcatctcgga
aatgtggacaaggaactggaaaggtggcaaaacgggaggaaaggtagaagaccgaataat
actgtggctaacttacaggagacaatggacaaagagctggagacccatcagctcgagcat
ggtcccaagactagaataattcctggccaaagtaataacgaagatgaagatgatgtggaa
gatataaatgttgccgaggatgatatgatggatgatgtgctgggtgttgatgataacgga
cgaagggctgatgaaacagaaaaactagaaacaggtaatagtccgcctgtagaaaagaag
gaagagtag

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