Salvia hispanica (chia): 125186008
Help
Entry
125186008 CDS
T09851
Name
(RefSeq) transcription factor HHO5-like isoform X1
KO
K28176
GARP family transcription factor, NIGT1 subfamily
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125186008
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125186008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
DUF3245
Motif
Other DBs
NCBI-GeneID:
125186008
NCBI-ProteinID:
XP_047938263
LinkDB
All DBs
Position
5:26310402..26311818
Genome browser
AA seq
260 aa
AA seq
DB search
MNFDLGSKNISEILSEVSGMDDFIKKSSMLDFHVHALEEELHKIEAFKRELPHCMHLLKH
VIERLKAESGRDGRVKASNEFTEKKDWRTSVQICTPMSRDQAPVFPLKSRFAEGLGNGNQ
FGGKLRNEGGAFSPFKRAMNEKSEADLSDDGTHHKKQRRCWSPELHKIFVDALHQLGGAQ
TAATPKQIRERMKVEGLTNDEVKSHLQKYRIYMKRVDSAEPIAVSGFPVDGGKKVVKGGS
AATSGQSIGNEDEDEDKDDD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatttgggctccaaaaacatttcagaaatcctctcagaagtttcaggcatg
gatgatttcatcaagaaatcatcgatgctggattttcatgtccatgcattggaagaagaa
ctgcacaagattgaagctttcaaacgtgaacttcctcactgcatgcacctgctcaaacat
gtgattgaaaggttgaaggcagagagcgggagagatggaagggtaaaagcgtcaaatgaa
ttcaccgagaagaaagattggaggacttctgttcagatctgtacaccgatgtcaagagat
caagcccctgtttttcccctgaaatcaagattcgcggaagggctgggaaatggaaatcag
tttggtggtaaactgaggaacgaaggaggggcattttcgcctttcaagagagcaatgaat
gaaaagagtgaggctgatttgagcgacgatggaactcatcacaagaaacagaggcgttgt
tggtctccggagttgcacaagatttttgttgatgccctccatcagcttggtggtgcgcag
acagcggctacacccaagcagattagggagcgtatgaaggttgaaggtctcactaatgat
gaagttaaaagtcatttacagaaatacagaatctatatgaagagagttgattcagcggag
ccgatagcagtttcagggttcccagtggatggtggaaagaaggtggttaaaggcggttct
gcagccaccagcggtcagagtatcggaaatgaagacgaagatgaagacaaagacgacgac
tag
DBGET
integrated database retrieval system
