KEGG   Salvia hispanica (chia): 125186046
Entry
125186046         CDS       T09851                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
shis  Salvia hispanica (chia)
Pathway
shis03030  DNA replication
shis03410  Base excision repair
shis03420  Nucleotide excision repair
shis03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125186046
   03410 Base excision repair
    125186046
   03420 Nucleotide excision repair
    125186046
   03430 Mismatch repair
    125186046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shis03032]
    125186046
   03400 DNA repair and recombination proteins [BR:shis03400]
    125186046
DNA replication proteins [BR:shis03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125186046
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     125186046
   MMR (mismatch excision repair)
    Other MMR factors
     125186046
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    125186046
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Ribophorin_II_3rd
Other DBs
NCBI-GeneID: 125186046
NCBI-ProteinID: XP_047938311
LinkDB
Position
5:complement(39648521..39649803)
AA seq 257 aa
MLELRLVQGSLLKKVVESIKELVTDAKFDCSPTGFSLQAFDSSHLALVSLLLRSEGFHHY
RCDRNISMGMNLDTVAKMLKFAGHDDIITLKADDASDSVTFMFESPRQDKSSKFEMKLMD
IESEHLGMPEAEYHAIVRMPSVEFSWICKHLSSIGDTVVISVTNENEGVEFSSTGDIVTA
NSVYKHNTTVDGEVNVEMNEPVSLRFALRYLNSFTKASPLSTTVTLSLSSELPLVVEYKI
AEMGYIRFYLPPKIDED
NT seq 774 nt   +upstreamnt  +downstreamnt
atgttggagctacggttggtacaggggagtctgttgaagaaggttgtggaatcgatcaag
gagcttgtaaccgatgccaagttcgactgctcccccaccggtttctcactgcaggctttc
gattccagccacttggcgctggtgtcgctgctgctccgttcggagggattccaccactac
cgctgcgaccgaaacatctccatggggatgaacctcgacaccgtggctaaaatgctcaag
ttcgccggacatgacgatatcatcactctgaaggccgacgacgccagcgactctgtcact
ttcatgttcgaaagccccagacaagataagagctcaaaatttgagatgaagctgatggac
attgagagtgagcatctaggaatgccagaagccgagtaccatgctattgttcgcatgcca
tctgttgagttctcttggatttgcaaacatcttagtagcattggtgacacagttgtcatc
tctgttacaaacgaaaacgaaggtgtggagttctcatccacgggtgatattgtaactgca
aatagtgtatataagcacaacaccactgttgacggcgaggtgaatgttgagatgaatgag
ccagtatctctcagatttgctcttaggtatctcaactccttcactaaggcctccccattg
tctaccactgtcactttaagtttgtcctcggagctcccattggtggtcgagtataagatt
gcagagatgggctacatacgcttctacttgcctcccaagattgacgaagattga

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