Salvia hispanica (chia): 125186294
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Entry
125186294 CDS
T09851
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO isoform X1
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125186294
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125186294
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125186294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf_RING_Vps8
zf-ANAPC11
FANCL_C
Prok-RING_4
zf-RING_Vps41
Prok-RING_1
Zf_2nd_IFT121
zf_RING_Vps8_fungal
RINGv
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
125186294
NCBI-ProteinID:
XP_047938603
LinkDB
All DBs
Position
5:240429..242631
Genome browser
AA seq
177 aa
AA seq
DB search
MCVKIPTLCGSHHLQRSFSLFLGLKMAISSYPTPADAGVLCVILANTAISISIFKEMFRS
ILNVIGINISSWEDFTVEPSNSGECCRRPSELYVEEFRSHSPSMQYESVFFHQCPKQECS
ICLTEFVPKAEINQLSCGHVFHKACLEKWLNYWNTTCPLCRNYMMPQEAEEDASCPM
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtaaagattccaactttgtgtggatctcaccatttacagaggtccttttccttg
tttttaggcttgaaaatggcgatttcatcgtaccctactccagcagacgcgggagtgctc
tgcgtaatcctggctaacacagccatatccatctccatcttcaaggagatgttccgctcc
atcctaaacgtcatcggcattaacatatcttcgtgggaggacttcacggtggagccctca
aactcaggcgagtgctgcagacgcccctcagagttgtacgtggaggagttcaggagccac
tcgccctctatgcagtacgagtcggtcttcttccaccaatgccccaagcaagagtgctcc
atctgcctgacagaattcgtgcccaaggccgagatcaaccagctctcctgcggccacgtc
ttccacaaggcgtgcctcgagaagtggctcaactactggaacacgacgtgccctctctgt
cggaactacatgatgccacaggaagctgaggaggatgcctcctgccccatgtga
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