Salvia hispanica (chia): 125186315
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Entry
125186315 CDS
T09851
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125186315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125186315
03016 Transfer RNA biogenesis [BR:
shis03016
]
125186315
03012 Translation factors [BR:
shis03012
]
125186315
04131 Membrane trafficking [BR:
shis04131
]
125186315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125186315
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125186315
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125186315
Translation factors [BR:
shis03012
]
Eukaryotic type
Elongation factors
125186315
Membrane trafficking [BR:
shis04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
125186315
Exosome [BR:
shis04147
]
Exosomal proteins
Proteins found in most exosomes
125186315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
DUF362
AAA_22
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
125186315
NCBI-ProteinID:
XP_047938623
LinkDB
All DBs
Position
5:23849312..23851648
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARFDEIIKEVASYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQILEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMVPTKPMVVETFSAYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAVKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagactcacatcaacattgtggtcattggccacgtcgactctggaaag
tccaccaccactggtcacttgatctacaagcttggtggtattgacaagcgtgtgatcgag
aggttcgagaaggaggctgctgagatgaacaagaggtcattcaagtatgcgtgggtgctc
gacaaactcaaggctgagcgtgaacgtggtatcaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcactgttattgatgcccccggacatcgtgactttatcaag
aacatgattacgggtacctcacaggccgactgtgctgtcctcatcattgactccaccact
ggtggttttgaggcaggtatctccaaggatgggcagacccgtgagcatgcattgcttgct
ttcactcttggagtgaagcaaatgatttgctgctgtaacaagatggatgccaccacacct
aaatactccaaggctaggtttgatgagatcattaaggaagttgcctcctacctcaagaag
gttggatacaatcccgagaagatcccattcgttcctatttctgggtttgagggagataac
atgattgagaggtccaccaaccttgactggtacaagggcccaacccttcttgaggcactt
gaccagatcttggagcccaagagaccatcagacaagcctctccgtctcccacttcaggat
gtttacaagattggtggtattggtacggtgcctgtgggtcgtgttgagactggtgttatc
aagcctggtatggttgtcacctttgccccatctggtttgacaactgaagtcaagtcagtt
gagatgcaccacgaggccttgcaagaggctcttcctggtgacaatgtggggttcaacgtg
aagaacgttgcagtcaaggacttgaagcgtgggtatgttgcctccaactccaaggatgat
cctgccaaggaagctgccaacttcacctcccaggtcatcatcatgaaccacccgggacag
attggcaatggatatgccccagtgctcgattgccacacctctcacattgcagtgaagttt
gctgagatcttgaccaagattgacaggcgatctggtaaggaactggagaaggagcccaag
ttcctgaagaatggtgatgctggtatgattaagatggttccgactaaacccatggtggtg
gaaactttctcagcgtaccctcctcttggacgatttgctgtccgtgacatgcgacagact
gttgctgttggtgtcatcaagagcgttgagaagaaggacccaactggtgccaaggttacc
aaggctgctgtcaagaagggagcaaagtga
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