Salvia hispanica (chia): 125186336
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Entry
125186336 CDS
T09851
Name
(RefSeq) putative ABC transporter B family member 8 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125186336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125186336
04147 Exosome [BR:
shis04147
]
125186336
04090 CD molecules [BR:
shis04090
]
125186336
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125186336
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125186336
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125186336
CD molecules [BR:
shis04090
]
Proteins
125186336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_21
AAA_30
ABC_ATPase
AAA_15
PRK
CHD5
Motif
Other DBs
NCBI-GeneID:
125186336
NCBI-ProteinID:
XP_047938642
LinkDB
All DBs
Position
5:18987853..18993608
Genome browser
AA seq
1242 aa
AA seq
DB search
MHSPEKEEAKLNDMGAEKEMRKSPSLTIIFRYADWLDILLMLLGTFGAVGDGMSTNCLLV
YVSRLFNSLGYGKSSQNNTNFLDEIEKCSLYFVYLGMAVMVVAFMEGYCWSKTSERQVLK
IRYKYLEAVLRQEVGFFDTQEATTSEIINSISKDTSLIQEVLSEKVPIFVMNMSVFVSGL
GFSVYFSWRLALVAFPTVVLLIIPGLIYGKYLVYLSKESFKEHGKANSVVGQALSSIKTV
YSFTAERSIIEKYGSILDRANMFGIRQGIAKGLAIGSTGLSFAIWALLAWYGSRLIMYRG
ESGGRIYAAGLSFVLGGLSLGSALPEVKYLTEASVAASRIFERIDRVPDIDGEDSKGVVL
DKIRGEIEFEHVRFSYPSRTDTPVLNDFNLSIEAGKTVALVGASGSGKSTAIALLQRFYD
ASGGTVRVDGVDITTLHLKWLRQKMGLVSQEHALFGTSVKENIMFGKLDATMDDVIAAAM
AANAHNFISQLPQGYETKVGERGALLSGGQKQRIAIARATIRNPVMLLLDEATSALDSES
EKLVQNALDQASMGRTTLVVAHKLSTIKNADLIAVVVNGSIAETGTHNELIDANGNYARL
AKLQRQMSVLDQEQNLEASSAARSSTGRKSTIGSSPASPLSIISFPPPPPPPDASPPPSF
RRLLSLNSPEWKQGLIGSISAVLFGTVQPIYALTIGGMISAFFAPSHAEMQTRIERYALI
FSSLCLASITLNLCQHYNFAYMGECLTRRIRLKMLEKILTFEAAWFDEDRNSSAALCSRL
SNEAYMVKSLVADRLSLLIQTASAVTTAMVMGLIIAWKLALVMIAVQPLTIFCFYIRKII
LSTITANFVKAQNQSTQIAAEAVYNHRIVTSFGSIGKVLEIFDQAQDAPRKEARKKSWLA
GVGIGSAQGLTFICWALDFWYGGTLVNRGEISAGDVFRTFFILVSTGKVVAEAGSMTSDL
VKGSAALASIFAILDRQSPISGSYNGGDGKGGKMSGDIEVKRVDFTYPARPEAQVLRDFS
LEVKAGTSVGLVGKSGCGKSTVIALIQRFYDVDRGSVKVDGVDIRLFDVEWYRKHMALVS
QEPVIYSGSIRDNIVFGKPDASENEVVEAARAANAHEFICGLKKGYDTECGERGVQLSGG
QKQRIAIARAIIRDPTVLLLDEATSALDVQSEQLVQEALDRVMVGRTTVVVAHRLNTIKN
LDSIAYVSEGKVVERGTYSQLKSKKGAFYDLASLQGVSAHHL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaccagaaaaggaggaagccaagttgaacgatatgggtgcggagaaggagatg
aggaagagtccatccttaaccatcattttcagatatgctgactggctagacattttgctc
atgttgttgggcacatttggggctgttggagatggaatgtcgacaaactgcttgctcgtg
tacgttagccgccttttcaatagtttgggctatggcaaatcgtctcagaataataccaat
ttcttggatgagattgaaaagtgtagcttatactttgtctacttggggatggcagttatg
gtagtagcatttatggaagggtactgctggagcaagacaagtgagaggcaagttttgaag
atcaggtacaagtatttggaggctgtgctgagacaagaagtgggattcttcgacacacaa
gaagcaaccacctctgagatcataaacagcatctcaaaagacacctctctcattcaagag
gtcctaagcgaaaaggtgccgatatttgtgatgaacatgtcggtgtttgtgtcggggctg
ggcttttccgtgtacttttcgtggaggctggcgctggttgccttccccacggtcgttctc
ttgatcataccgggcctcatctacgggaaataccttgtgtatttgtctaaggagagcttc
aaagagcatgggaaggcaaactcggtggtggggcaggcgctgagctctattaaaactgtc
tactctttcacggcggagaggagcatcattgaaaagtatggttccattttggacagagca
aacatgtttgggatcagacagggaatcgcgaaagggctcgctattggaagcaccgggctt
tctttcgcgatatgggcgctgctcgcgtggtatggcagccgtctcatcatgtatagaggg
gagagtggtgggagaatttacgccgccggactctcctttgttttgggtggactttcgctg
ggatctgcactgccggaagtgaaatacttgacggaagcatcagtggcagcatctagaatc
ttcgagaggatcgaccgggtcccggatatcgacggcgaagacagcaagggcgtggtgcta
gacaagatacgaggagagatcgaattcgagcacgtgagattctcgtacccatcgcgcacg
gacacgcccgtgctcaacgacttcaacctcagcatcgaagcgggaaaaacagtagctctc
gtcggagcaagcggaagcgggaaatccactgccattgcattattgcagcgcttctacgat
gccagcggaggaaccgtgcgtgtcgatggggtcgacatcacaactctacacttgaaatgg
cttagacagaaaatggggctggttagccaagaacacgcactgtttggaacatcagtgaag
gaaaatatcatgtttgggaaactggatgcaaccatggatgatgtgattgccgcagccatg
gctgccaatgctcataatttcatcagccagcttccccaaggatacgagactaaggttggg
gagagaggagcattgctatcgggtgggcagaagcaaaggattgcgattgctagggccacc
atcagaaaccccgtcatgcttcttctagacgaagccaccagcgcactcgactctgaatcc
gagaagctcgtgcagaacgcactcgatcaagcctcaatgggcagaacaacactagtggta
gcacacaagctctccacaataaagaacgcagatttgattgctgtagtggttaatggtagt
atagctgagaccggcacacacaacgagctcatcgacgccaacggcaactacgcaagatta
gccaaacttcagaggcaaatgagcgtcttagaccaagagcaaaacctcgaggcgtcctcc
gctgccaggagcagcaccggaagaaagagcacaataggatcaagccctgcttcacctcta
tcaatcatttcctttccaccaccaccaccaccaccagatgcttcccctccgccctcattc
cgccgcctactttcactaaactccccggaatggaaacaaggcctgatcggcagcatctca
gctgtgttattcggcaccgtgcagccaatctacgcgctaacaataggcggcatgatctca
gccttcttcgccccgagccacgcagagatgcaaacccgcatcgagagatacgccctcata
ttcagctccctctgcctcgcctccatcaccctgaacctctgccagcactacaacttcgcc
tacatgggcgagtgcctcacgaggcggatccgcctcaagatgctcgagaagatcctcaca
ttcgaggccgcctggttcgacgaggaccgcaactccagcgcagctctctgctcgagactc
tccaacgaggcatacatggtcaaatccctggtggcagacagattgtccctgctgatccag
acggcctcggccgtcaccaccgcaatggtgatggggctaatcatagcttggaagctggct
cttgtcatgatcgcagtgcagcctctcaccatcttctgcttctacataagaaaaatcata
ctctccaccatcacagccaacttcgtcaaggcgcagaatcagagcactcagatcgccgcg
gaggcagtttacaaccacagaatcgtgacctcgttcgggagcatagggaaagtgcttgag
atattcgaccaggctcaagacgcgccgaggaaggaggcgaggaagaagtcgtggctggcg
ggagtcgggatcgggtcggctcaaggcctcactttcatctgctgggctctcgatttctgg
tacggcggcacgctggttaacagaggagagatatcggccggagacgtgttccggactttt
ttcattttggtgagcaccggaaaagttgtggcggaagccggcagcatgacttccgatctc
gtcaaaggatccgcggcgttagcttccattttcgcaatcttagatcgacaatcaccaatc
tccggatcctataatggcggagacggaaaaggagggaagatgagcggcgacatagaggtg
aagagggtggatttcacgtatccagcgcggccggaggcgcaggtgctgcgggatttcagc
ttggaagttaaggcagggacgagcgtcgggctagtaggaaagagtggatgtgggaagtcg
accgttatagcccttatccagagattctacgacgtcgaccgtggctcggttaaggtggac
ggtgttgacataaggctgttcgacgtggagtggtaccggaaacacatggccctcgtcagc
caggagccagtcatctattccggcagcatccgcgacaacatagtttttgggaagcccgat
gcgtccgagaatgaggtggtggaggccgcgagagcggccaatgcacatgaattcatctgt
gggctgaagaaggggtacgacacggaatgcggagaaagaggggtgcagctatcgggaggg
cagaagcagaggatcgccatagccagagccatcatccgtgacccaacggtgctgctgctg
gatgaggcgaccagcgcgctggacgtgcagtcagagcagctggtgcaggaggcgctggac
agggtgatggtagggaggacgacggtggtggtggcgcaccgcctcaacacaatcaagaac
ttggattctattgcttatgtttcggaggggaaagtggtggagcgtgggacgtatagccaa
cttaagagcaagaagggtgccttctacgatcttgctagccttcaaggtgtatcggctcat
catctctga
DBGET
integrated database retrieval system
