Salvia hispanica (chia): 125186362
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Entry
125186362 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125186362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125186362
03036 Chromosome and associated proteins [BR:
shis03036
]
125186362
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125186362
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125186362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Antimicrobial10
Motif
Other DBs
NCBI-GeneID:
125186362
NCBI-ProteinID:
XP_047938669
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All DBs
Position
5:40833003..40838677
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AA seq
707 aa
AA seq
DB search
MPAVTSDSGEFNSLSIVPHSLETQTPRVYPLRTRRTAPPFGRVSISWGRGSTLRVSLLQP
GGVESDGEVVEVNLTNAEEGGEVSEAERQRIAHGSVTPFALLQSRKNQMDELQYDKTWWV
HVMEYSNEIKSLLGTSKSYITPTIEDPKALLEDVEQPTSLKAAWELVEMFYADKQSQTWI
PERLLDWLADFDCLLSATQPTVHARLVAFQKALVTIQEVENDPEYWEIMSSALSIGWLDI
VVKMLRLHGSYQLDQLGTREIESGLVEAVAVLISQMPRLRPHISDEKLGECYNTKPEFMK
AWEKWRTQITKLDCHPYWLQCDHKQTRDGLKNMIQIMLGNANVISNATYHWIELYISHLL
YIRPFTVGLESMYTLAQKCMHLKPITNRHKLMGLLIGILEENTEVVLAECSRSFGPWMIT
HAAELLTAGSAQAEMLLHEEQSKIGGICIEELHRLIYAQVLSSHVLTWNIAPIYLTSCMK
QGLGLLENLLYKQPVQRQQVLSESIEICRLNGIDYVSRHMMKIAGVHYWKHGDKGSAVHW
LQQAQDEVRLNRIAKHLFDIVGKSVSDESFKQWEGMIDLLGTESRTAGGLEFLKKYRDFR
RSLQQVQDGFATDDARKASEALVSLMRNPSTPQQFWLHLLNESLELLNWKDRPLFNVSQT
NLLLNKLQDLSLARLLPGYVDADLPPEAFRSVRLALATNLGRAILEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagtgacctcagattccggcgagttcaactcgctctccatcgttccacactct
ctggagacgcagacgccgagagtctatcctctgcggacgcgccgcacagcgccgccgttc
gggcgcgtctcgatctcctggggtcgtggaagcacgctccgcgtctcactcctgcaacct
ggaggagttgaatccgatggggaagttgtggaagtgaatctcaccaatgcggaggaagga
ggagaagtttccgaagctgagcggcagagaatcgcgcacggctcggtcacgcccttcgcg
cttctccagagccggaagaatcagatggacgagttgcagtatgacaaaacttggtgggta
catgtaatggagtacagcaatgaaattaaatctctccttggtacttcaaagtcatatatt
acaccaaccatcgaagacccgaaggcattattggaggatgttgagcagccaacctcattg
aaagctgcctgggaactggtggaaatgttttatgcagataagcaatctcagacctggatt
cctgaacgcctccttgattggttagctgattttgattgtttgctatctgcaactcagcca
actgtccatgcaagacttgtggctttccagaaagcacttgtaaccatacaggaagttgag
aatgatccagagtattgggaaattatgtcgtctgctttaagcattggctggctagacatt
gttgtaaaaatgttgcggttgcatggatcttaccagttggaccagcttggaactcgagag
attgaaagtggactcgttgaagcagttgctgttcttatatcacagatgccacgattgcgt
cctcatatatcagatgaaaaattaggagaatgctacaacaccaagcctgagtttatgaaa
gcatgggagaagtggagaactcaaatcactaaactggactgccatccttactggcttcag
tgtgatcataaacagaccagagatggacttaaaaacatgattcagataatgctgggaaat
gctaatgttatctccaacgcaacatatcactggatagagctttacatttctcaccttttg
tatattaggcctttcactgtgggtttagaaagtatgtataccctagcccagaaatgcatg
catttaaaaccaattaccaatcgacataagttgatgggactcttaattgggattcttgaa
gaaaatacagaggttgttctcgccgaatgctcaagatcatttggcccctggatgataacc
catgctgcagagctgctgacagctggaagcgctcaagcagaaatgcttttgcatgaggag
cagtctaagattggaggaatctgcatagaagagcttcatcgactgatttatgctcaagtt
ctatcatctcatgtcttgacatggaatatcgctcctatatatttgacttcatgcatgaag
caaggtttgggtttattggagaatttactgtacaagcagcccgtacagcgtcagcaagtg
ttatcggagagcatagagatctgtcgtctcaatggaatagattatgttagtcgccatatg
atgaagatagctggagttcattactggaagcatggagacaaaggttccgctgtgcactgg
ctgcagcaagctcaggatgaagttcgtttaaaccgaattgcgaagcatttatttgatatt
gttggaaaatcagtttctgatgaaagtttcaagcaatgggaaggaatgattgatttgctg
ggaactgagtccagaactgctggcggtcttgagttcttgaaaaagtacagggatttccgg
cgatccctccagcaagttcaggatggattcgcaactgacgatgctagaaaagcttcagaa
gccctcgtatctctaatgagaaacccttctacacctcaacaattctggcttcatctgtta
aacgagtcactggaattgctgaactggaaggatcgtcccttgttcaacgtttctcaaacg
aaccttttgttgaataagttgcaagatctgtcgcttgcacgacttctgccaggctacgtt
gatgctgacttgccaccagaggccttcaggtccgtccgactggcccttgccaccaatctc
ggccgcgccatccttgaagagtaa
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