Salvia hispanica (chia): 125186491
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Entry
125186491 CDS
T09851
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125186491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125186491
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125186491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
SMC_N
AAA_18
AAA_28
AAA_33
AAA_22
Rad17
RsgA_GTPase
nSTAND3
Zeta_toxin
ABC_ATPase
KTI12
Motif
Other DBs
NCBI-GeneID:
125186491
NCBI-ProteinID:
XP_047938817
LinkDB
All DBs
Position
5:complement(30539820..30546651)
Genome browser
AA seq
1504 aa
AA seq
DB search
MAVSGNIPGPPPAKPPPYVVLPLLHRVIQNDIKNCYISHVSIIHTHIREHCSRLEMAAAV
ARDELTRSMSRKASFASSSTKGWASASFREAFGAQGGDVFQKSGRQDDEEQLKWAAIERL
PTYDRMRKGILKQVLDNGNVIHEEIDFGNLGVHNKKHIMDTMLKALEDDNERFLLRLRDR
INRVGINVPKCEVRFEHLSVEGDAFAGSRALPTLYNSTINAVEGILDFLRLFPSKKKTVR
ILTDVSGIVRPSRLTLLLGPPSSGKTTLLKALAGKLEQDLRESGKVTYCGHELREFIPQR
TCAYISQHDLHHGEMTVRETLDFSSRCFGVGARYELLAELSRREKDAGIKPDPEIDAFMK
AIAVSGQRTSLVTDSVLKVLGIDICADTMVGDEMRRGISGGQKKRVTTGEMLVGPAKVFL
MDEISTGLDSSTTYQIIKYMKQMVHIMDITMIISLLQPAPETFELFDDIILLSEGQIVYQ
GPREHVLGFFENVGFKCPERKGVADFLQEVTSKKDQEQYWSRKNVPYEYVSDSDFAFRFQ
SFHVGQKIFGELGVPYDKSRVHPAALVKEKYGISNKDLLKACLSREWLLMQRNSFVYIFK
TTQITIMALFTFTVFFRTQMKHGHIDNGGKFYGALFFSLINVMFNGMAELAMTIFRLPVF
FKQRDALFYPAWAFALPIWLLRLPISVMESGIWIILTYYTVGYAPSASRFFMQFLAFVGI
HQMALGLFRFIAALGRTQVVANTLGTFTLLLVFVLGGFIIAKDDLQPWMRWAYYLSPMSY
GQNAIVIVEFLDPRWSGKNDDGRFAGRTVGEELLAGRGMFTEQHWYWICVIALFGFSLFF
NLCFVAALTYLKPLGDSKSGGSILEDETTKNRISANGQTNEVRNAQEQDTKRGMVLPFKP
LSLSFDNVNYYVDMPAEMKGEGVEETRLQLLRGVSGAFRPGVLTALMGVSGAGKTTLMDV
LAGRKTGGYIEGDIRVSGFPKNQETFARVSGYCEQNDIHSPHVTVYESLLYSAWLRLPAD
VNKATRQMFVEEVMDLVELNSLRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE
PTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQVIYAGPL
GSNSQLLVDYFESISGVPKIRQDYNPATWMLEVSSAAVESQLDMDFAEIYSNSDLNRKNL
ELIQKLSNPEAGSHDLFFPTKYSQPLLVQFVACFWKQYWSYWRNPQYNVIRFFMTTVIGL
IFGVIFWNKGTTMYKEQDLTNLLGAMYAAVLFLGGTNTSAVQSVVAIERTVFYRERAAGM
FSALPYAFAQVSVETSYIAVQTFLYSLLLYSMIGFEWGATKFIWFYYYVFMCFVYFTFYG
MMLVALTPSYQIAAILMSFFLSFWNLFSGFLIPRMLIPVWWRWYYWGSPVAWTIYGLVTS
QLGDKTEHVLVPDHGDMPIKDYLKVVLGYDSDFLGYVALAHVGWALLFFVVFVYGIKVLN
FQRR
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgagcgggaatattccgggtccaccgccggccaagcccccgccctatgtagtt
ctgccgctgcttcatagggttatacaaaatgacataaagaattgttacatatctcatgta
agcatcatacatactcatataagagagcactgtagcaggcttgaaatggcggctgcagtg
gcacgagacgagttgacacggtccatgagccgtaaggcgagttttgcatcgtccagtact
aaaggctgggcttctgcaagcttccgagaggcgtttggagctcagggaggcgacgtgttc
cagaaaagtgggagacaagacgatgaggaacagctcaagtgggctgccattgagaggctc
cctacttacgatcggatgaggaaaggcatcttgaagcaagtgttggacaatggcaacgtg
attcatgaagaaattgattttggtaaccttggagtccacaacaagaagcatatcatggac
accatgttgaaagctcttgaagatgataatgagaggtttcttttgaggcttagagacaga
ataaatagggttggaattaatgtgccaaaatgtgaagttagatttgagcatctatctgtt
gaaggagatgcatttgctggaagccgagctcttcctactctttacaattcaactataaac
gccgttgagggaattcttgatttcttgaggcttttcccatccaaaaagaagactgttagg
atactaaccgatgtttctggaatagtgaggccatcaagattgacccttctattaggccct
ccgagctctggtaagacgacgttgctgaaggcgcttgctgggaagctagaacaagatcta
agggagagtgggaaggtcacctattgtggccatgagctgagggagttcattcctcagaga
acttgtgcctacataagccagcatgatcttcaccatggggagatgacagtgagggagacc
ttggatttctcgagccgttgctttggtgttggagctaggtatgaactgctagcagagctt
tctagaagggagaaagatgcaggcattaagccagatcctgaaatagatgccttcatgaaa
gccattgctgtttctgggcagaggactagtttggtgacagattctgtgctcaaggttctt
ggaattgatatttgtgctgatacaatggttggtgatgagatgaggaggggaatttctgga
gggcagaagaagcgtgtgacgactggagagatgttggttggccctgcaaaagttttcttg
atggatgaaatatcgactggtctagacagctccacgacatatcaaatcatcaaatacatg
aagcaaatggtccacattatggacataaccatgatcatctccctcctccaacctgcccct
gaaactttcgaactttttgatgacataatcttgctttcagaagggcagattgtctaccaa
ggcccccgtgagcacgttcttggtttctttgagaatgtgggattcaaatgcccagagagg
aaaggagtagccgatttcctacaagaagtcacctccaagaaggatcaagaacagtactgg
tcaaggaaaaatgtgccttatgaatatgtatcagattctgattttgcctttcgctttcaa
tccttccacgtcgggcagaagatctttggtgagttgggagtgccatacgacaagagtaga
gttcatccagctgcattggtgaaggaaaagtacggtatctccaacaaagacctgttgaag
gcatgtctgtctagggagtggctgctaatgcagcgcaattcctttgtttatattttcaag
acaacgcagatcaccatcatggctctcttcaccttcacggtgttcttcagaacacagatg
aagcatggacacattgataacggaggaaaattttacggtgccttgtttttcagcctcatc
aatgtcatgttcaatgggatggctgagcttgcaatgaccatttttaggcttcctgtgttt
ttcaaacaacgggacgccttgttctacccggcttgggcttttgccctcccaatttggctc
ctgaggcttccaatctcggtcatggagtcagggatttggatcattctcacatattacact
gtgggatatgcaccttctgctagtaggttctttatgcagttcctggcgtttgtgggcatc
catcagatggcattaggcctctttcgtttcatagcagcgcttggaagaacgcaggtagtt
gcaaacactctaggaaccttcacattgttgttggtgttcgtacttggtggattcatcatt
gccaaagatgatcttcaaccatggatgagatgggcttactatctttctcctatgtcgtat
ggccaaaacgcgattgtcatagtagaatttctcgatcctagatggtctgggaaaaatgac
gatggcagatttgctggaagaactgtgggagaagagctattggctggaaggggaatgttt
accgaacaacactggtattggatttgtgttattgcactcttcggattttctctcttcttc
aacttgtgctttgttgctgcgctaacatacttgaaaccattgggagattcaaaatctggt
ggttcaatcttggaggatgaaactacgaaaaacagaattagtgctaatggccaaacaaat
gaagtgagaaatgctcaagaacaagataccaaacgcgggatggtgcttcctttcaaaccc
ttgtcgctttcctttgataacgtgaactactacgttgatatgcctgcagaaatgaaaggc
gaaggggttgaggagacacgtctgcagctactgaggggcgtcagtggtgcatttagacca
ggagttttgacagcattgatgggagtaagtggtgccgggaaaaccacattgatggatgtt
ctagccggaaggaaaacaggtggatacattgaaggagacatcagagtttcaggtttccca
aagaatcaagaaacgtttgctcgtgtgagtggctactgtgagcagaatgacatccattcc
ccacatgtcactgtctatgaatctctcctatattcagcctggctccgtcttccagcagat
gtaaacaaggcaacacggcagatgtttgtggaggaagtgatggacttagttgagctgaac
tcgttgagaaactccctagtcgggcttcctggagtcgatggtttatcaacagaacagagg
aaaaggctcaccattgcggttgagctagttgcaaatccatcaatcatcttcatggatgag
ccaacgtcgggcttggatgctcgagctgcagccattgtcatgcgtgctgtgaggaacacg
gtcgatacagggagaaccgtcgtttgcacaatccatcaaccaagcatagacatctttgaa
tcatttgatgagctatttttaatgaagagaggtgggcaagtcatatatgcaggacctttg
ggcagcaactctcaacttctagtagactactttgagtctatttccggagttcctaaaatc
agacaagactacaatccagctacatggatgctagaagttagctctgcagcagttgaatct
caactagacatggactttgcagaaatctactctaactctgatctcaacaggaagaatctg
gaacttatccagaagctgagcaatccagaagcaggatcacatgacctcttcttccccacc
aaatactcacaacctcttttggtccaattcgtggcgtgtttttggaaacaatattggtct
tactggaggaatcctcagtataatgtgatcagattcttcatgacaacagtgattggcctt
atattcggcgtcatcttctggaacaaaggaacaacaatgtataaagaacaggacctgacg
aatcttctaggagcaatgtatgcagcagtgctattcctaggtggaacaaacacatctgca
gttcaatcggttgtggccatagagagaacagtgttctatcgcgagagagctgcagggatg
ttctcagcattgccttatgcattcgcacaggtgtctgttgagacaagctacatcgcggtg
cagacattcttgtacagccttctcctgtactcaatgattggatttgagtggggagcaacc
aagttcatatggttctactactatgtgttcatgtgcttcgtctacttcaccttctacggc
atgatgcttgtggctctcacacctagctaccagattgctgcaattctcatgtcatttttt
ctcagcttctggaatctcttctctggttttctcattcccaggatgttgatcccggtgtgg
tggaggtggtactactggggctctccggtggcatggacgatatacgggctggtgacgtca
caactgggagacaagacggagcatgttcttgttccggaccatggtgatatgcctattaag
gactatcttaaagttgtcttaggttatgactctgatttccttggatatgttgccttggct
catgttggatgggctttgctcttctttgttgtctttgtctatggcatcaaggtcttgaat
ttccaaaggagatag
DBGET
integrated database retrieval system
